RNA–Protein interactions for RNA: ENST00000417345.2

CNTFR-203, Transcript of ciliary neurotrophic factor receptor, humanhuman

TSL 3

Gene CNTFR, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-203ENST00000417345 SEPT2Q15019 361 aa16.32■□□□□ 0.2
CNTFR-203ENST00000417345 CCL15Q16663 113 aa16.32■□□□□ 0.2
CNTFR-203ENST00000417345 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
CNTFR-203ENST00000417345 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
CNTFR-203ENST00000417345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.32■□□□□ 0.2
CNTFR-203ENST00000417345 PTPRFP10586 1907 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 SMIM22K7EJ46 135 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 ALDH1A1P00352 501 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 TFAP4Q01664 338 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 TBC1D10CQ8IV04 446 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 KCNH4Q9UQ05 1017 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 AFG3L2Q9Y4W6 797 aa16.31■□□□□ 0.2
CNTFR-203ENST00000417345 PLIN4Q96Q06 1357 aa16.3■□□□□ 0.2
CNTFR-203ENST00000417345 GREB1LQ9C091 1923 aaPredicted RBP16.3■□□□□ 0.2
CNTFR-203ENST00000417345 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
CNTFR-203ENST00000417345 EPB41L2O43491 1005 aaKnown RBP16.3■□□□□ 0.2
CNTFR-203ENST00000417345 GJA5P36382 358 aa16.3■□□□□ 0.2
CNTFR-203ENST00000417345 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
CNTFR-203ENST00000417345 MTMR2Q13614 643 aa16.3■□□□□ 0.2
CNTFR-203ENST00000417345 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
CNTFR-203ENST00000417345 CCDC84Q86UT8 332 aaPredicted RBP16.3■□□□□ 0.2
CNTFR-203ENST00000417345 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
CNTFR-203ENST00000417345 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.3■□□□□ 0.2
CNTFR-203ENST00000417345 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 CYP21A2P08686 494 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 BACE1P56817 501 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 NEDD1Q8NHV4 660 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 NCOA7Q8NI08 942 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 UBAC1Q9BSL1 405 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 GOPCQ9HD26 462 aa16.29■□□□□ 0.2
CNTFR-203ENST00000417345 NEDD4P46934 1319 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 A0A0G2JLL6 359 aaPredicted RBP16.28■□□□□ 0.2
CNTFR-203ENST00000417345 ERICH2A1L162 156 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 CA12O43570 354 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 RAD21O60216 631 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 TTLL1O95922 423 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 FGRP09769 529 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 HMGCS2P54868 508 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 JAG1P78504 1218 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 KRT32Q14532 448 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
CNTFR-203ENST00000417345 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
CNTFR-203ENST00000417345 SHROOM1Q2M3G4 852 aaPredicted RBP16.28■□□□□ 0.2
CNTFR-203ENST00000417345 PRRT2Q7Z6L0 340 aaPredicted RBP16.28■□□□□ 0.2
CNTFR-203ENST00000417345 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
CNTFR-203ENST00000417345 NBPF3Q9H094 633 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 KIAA1683Q9H0B3 1180 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 PNMA3Q9UL41 463 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
CNTFR-203ENST00000417345 SLC27A2O14975 620 aa16.27■□□□□ 0.2
CNTFR-203ENST00000417345 KDM4AO75164 1064 aa16.27■□□□□ 0.2
CNTFR-203ENST00000417345 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.2
CNTFR-203ENST00000417345 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.2
CNTFR-203ENST00000417345 TM4SF4P48230 202 aa16.27■□□□□ 0.2
CNTFR-203ENST00000417345 BRI3BPQ8WY22 251 aa16.27■□□□□ 0.2
CNTFR-203ENST00000417345 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
CNTFR-203ENST00000417345 MS4A4AQ96JQ5 239 aa16.27■□□□□ 0.2
CNTFR-203ENST00000417345 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.2
CNTFR-203ENST00000417345 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
CNTFR-203ENST00000417345 B4E1Z4 1266 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 E7EWF7 191 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 EEF2P13639 858 aaKnown RBP16.26■□□□□ 0.19
CNTFR-203ENST00000417345 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 NECTIN1Q15223 517 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 LPAR1Q92633 364 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
CNTFR-203ENST00000417345 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 MTMR4Q9NYA4 1195 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 SYNPO2Q9UMS6 1093 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 TMX2Q9Y320 296 aa16.26■□□□□ 0.19
CNTFR-203ENST00000417345 OSBPP22059 807 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 TAF1CQ15572 869 aaPredicted RBP16.25■□□□□ 0.19
CNTFR-203ENST00000417345 SH3D19Q5HYK7 790 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 CLEC10AQ8IUN9 316 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 PARK7Q99497 189 aaKnown RBP16.25■□□□□ 0.19
CNTFR-203ENST00000417345 TCP11L1Q9NUJ3 509 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 SAGE1Q9NXZ1 904 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
CNTFR-203ENST00000417345 SLC45A1Q9Y2W3 748 aa16.25■□□□□ 0.19
CNTFR-203ENST00000417345 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
CNTFR-203ENST00000417345 PDHXO00330 501 aa16.24■□□□□ 0.19
CNTFR-203ENST00000417345 IRX3P78415 501 aaPredicted RBP16.24■□□□□ 0.19
CNTFR-203ENST00000417345 TTC14Q96N46 770 aa16.24■□□□□ 0.19
CNTFR-203ENST00000417345 ZFYVE28Q9HCC9 887 aa16.24■□□□□ 0.19
CNTFR-203ENST00000417345 BTBD19C9JJ37 291 aa16.23■□□□□ 0.19
CNTFR-203ENST00000417345 IGF2BP3O00425 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNTFR-203ENST00000417345 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms