RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CNTNAP1P78357 1384 aa19.79■□□□□ 0.76
CALD1-204ENST00000417172 WNT10BO00744 389 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 EIF6P56537 245 aaKnown RBP19.78■□□□□ 0.76
CALD1-204ENST00000417172 NBPF11Q86T75 865 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 DGKHQ86XP1 1220 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 CRACR2BQ8N4Y2 399 aaPredicted RBP19.78■□□□□ 0.76
CALD1-204ENST00000417172 TMEM47Q9BQJ4 181 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 KAT14Q9H8E8 782 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 DDAH1O94760 285 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 IFNAR1P17181 557 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 MICALL2Q8IY33 904 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 PNMA1Q8ND90 353 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 ZBED3Q96IU2 234 aaPredicted RBP19.78■□□□□ 0.76
CALD1-204ENST00000417172 EHD4Q9H223 541 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 DHX36Q9H2U1 1008 aaKnown RBP19.78■□□□□ 0.76
CALD1-204ENST00000417172 SWAP70Q9UH65 585 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 CNPY2Q9Y2B0 182 aa19.78■□□□□ 0.76
CALD1-204ENST00000417172 hCG_1642624A0A1W2PR95 340 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 ENTPD3O75355 529 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 NPM3O75607 178 aaKnown RBP19.77■□□□□ 0.76
CALD1-204ENST00000417172 CDKL5O76039 1030 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 RCAN1P53805 252 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 DNM1Q05193 864 aaKnown RBP19.77■□□□□ 0.76
CALD1-204ENST00000417172 CPLX2Q6PUV4 134 aaKnown RBP19.77■□□□□ 0.76
CALD1-204ENST00000417172 SAMD7Q7Z3H4 446 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 MTMR14Q8NCE2 650 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 TMOD2Q9NZR1 351 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 ATRNL1Q5VV63 1379 aa19.77■□□□□ 0.76
CALD1-204ENST00000417172 FMNL1O95466 1100 aaPredicted RBP19.76■□□□□ 0.75
CALD1-204ENST00000417172 RESTQ13127 1097 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 ANKS1AQ92625 1134 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 C8orf76Q96K31 380 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 CSRNP1Q96S65 589 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 ALG1Q9BT22 464 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 KIF3AQ9Y496 699 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 ASTN2O75129 1339 aaPredicted RBP19.76■□□□□ 0.75
CALD1-204ENST00000417172 PLIN4Q96Q06 1357 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 MPHOSPH10O00566 681 aaKnown RBP19.76■□□□□ 0.75
CALD1-204ENST00000417172 PRPF40AO75400 957 aaKnown RBP19.76■□□□□ 0.75
CALD1-204ENST00000417172 LMNB1P20700 586 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 SSRP1Q08945 709 aaKnown RBP19.76■□□□□ 0.75
CALD1-204ENST00000417172 FUT2Q10981 343 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 TMEM39BQ9GZU3 492 aa19.76■□□□□ 0.75
CALD1-204ENST00000417172 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
CALD1-204ENST00000417172 NT5C2P49902 561 aa19.75■□□□□ 0.75
CALD1-204ENST00000417172 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
CALD1-204ENST00000417172 TBC1D10BQ4KMP7 808 aaPredicted RBP19.75■□□□□ 0.75
CALD1-204ENST00000417172 STAG2Q8N3U4 1231 aa19.75■□□□□ 0.75
CALD1-204ENST00000417172 LMBRD1Q9NUN5 540 aa19.75■□□□□ 0.75
CALD1-204ENST00000417172 CNOT7Q9UIV1 285 aaKnown RBP19.75■□□□□ 0.75
CALD1-204ENST00000417172 IGKV6D-41A0A0C4DH26 115 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 CCDC196A0A1B0GTZ2 297 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 CALM1P0DP23 149 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 CALM2P0DP24 149 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 CALM3P0DP25 149 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 RPS12P25398 132 aaKnown RBP19.74■□□□□ 0.75
CALD1-204ENST00000417172 TMTC3Q6ZXV5 915 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
CALD1-204ENST00000417172 COL2A1P02458 1487 aaPredicted RBP19.74■□□□□ 0.75
CALD1-204ENST00000417172 STK36Q9NRP7 1315 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 RRP1BQ14684 758 aaKnown RBP19.74■□□□□ 0.75
CALD1-204ENST00000417172 LRRC47Q8N1G4 583 aaKnown RBP19.74■□□□□ 0.75
CALD1-204ENST00000417172 FBXO18Q8NFZ0 1043 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 CTCFLQ8NI51 663 aaPredicted RBP19.74■□□□□ 0.75
CALD1-204ENST00000417172 MTMR4Q9NYA4 1195 aa19.74■□□□□ 0.75
CALD1-204ENST00000417172 FIBPO43427 364 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 TRAK2O60296 914 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 GDF11O95390 407 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 FAM151AQ8WW52 585 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 PIBF1Q8WXW3 757 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 TRIM34Q9BYJ4 488 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 CNTNAP5Q8WYK1 1306 aa19.73■□□□□ 0.75
CALD1-204ENST00000417172 JAG1P78504 1218 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 CCDC178Q5BJE1 867 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
CALD1-204ENST00000417172 MYO1BO43795 1136 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 GOLGA8HP0CJ92 632 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 PDIA4P13667 645 aaKnown RBP19.72■□□□□ 0.75
CALD1-204ENST00000417172 NOVP48745 357 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 CERKLQ49MI3 558 aaPredicted RBP19.72■□□□□ 0.75
CALD1-204ENST00000417172 TATDN1Q6P1N9 297 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 TRIM22Q8IYM9 498 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 DPF2Q92785 391 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 SHISA4Q96DD7 197 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 CPVLQ9H3G5 476 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 MAD2L2Q9UI95 211 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 ATP6V1DQ9Y5K8 247 aa19.72■□□□□ 0.75
CALD1-204ENST00000417172 KIF28PB7ZC32 967 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 GRM4Q14833 912 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 SLC35G1Q2M3R5 365 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 TPRNQ4KMQ1 711 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 KRT40Q6A162 431 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 USP48Q86UV5 1035 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 METTL16Q86W50 562 aaKnown RBP19.71■□□□□ 0.75
CALD1-204ENST00000417172 FOXP4Q8IVH2 680 aaPredicted RBP19.71■□□□□ 0.75
CALD1-204ENST00000417172 RNF181Q9P0P0 153 aa19.71■□□□□ 0.75
CALD1-204ENST00000417172 TFIP11Q9UBB9 837 aaKnown RBP19.71■□□□□ 0.75
CALD1-204ENST00000417172 CLIP2Q9UDT6 1046 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms