RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 E2F5Q15329 346 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 RBM26Q5T8P6 1007 aaKnown RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 CABP7Q86V35 215 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 VCXQ9H320 206 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 PLCB1Q9NQ66 1216 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 RRP15Q9Y3B9 282 aaKnown RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 OPHN1O60890 802 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 ITGA6P23229 1130 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 GOLGA5Q8TBA6 731 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 EEF2KMTQ96G04 330 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 AATFQ9NY61 560 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBR4-205ENST00000417040 ABCC1P33527 1531 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 GCNT3O95395 438 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 SH3BP5O60239 455 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 STX2P32856 288 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
UBR4-205ENST00000417040 GYS2P54840 703 aa13.36□□□□□ -0.27
UBR4-205ENST00000417040 BACH1O14867 736 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 VPS41P49754 854 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 ADCY1Q08828 1119 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 WHAMMP3Q1A5X7 153 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 CCDC13Q8IYE1 715 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
UBR4-205ENST00000417040 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 USH1GQ495M9 461 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
UBR4-205ENST00000417040 CUL7Q14999 1698 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 HERC4Q5GLZ8 1057 aaPredicted RBP13.35□□□□□ -0.27
UBR4-205ENST00000417040 CASC4Q6P4E1 433 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 CCT6BQ92526 530 aa13.35□□□□□ -0.27
UBR4-205ENST00000417040 ARHGAP42A6NI28 874 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 KRIT1O00522 736 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 GMNNO75496 209 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 SNCBQ16143 134 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 MYCT1Q8N699 235 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 FAM184BQ9ULE4 1060 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 MTMR6Q9Y217 621 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 ZAP70P43403 619 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 BIN2Q9UBW5 565 aaPredicted RBP13.34□□□□□ -0.27
UBR4-205ENST00000417040 CETN3O15182 167 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 C2orf54Q08AI8 447 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 CCDC14Q49A88 953 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 FNBP4Q8N3X1 1017 aaPredicted RBP13.34□□□□□ -0.27
UBR4-205ENST00000417040 FAN1Q9Y2M0 1017 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
UBR4-205ENST00000417040 MRPL44Q9H9J2 332 aaKnown RBP13.34□□□□□ -0.27
UBR4-205ENST00000417040 I3L4J1 428 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 MAN1A1P33908 653 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 SNX16P57768 344 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 IFT88Q13099 833 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
UBR4-205ENST00000417040 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
UBR4-205ENST00000417040 A0A0D9SFI3 127 aa13.33□□□□□ -0.27
UBR4-205ENST00000417040 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.27
UBR4-205ENST00000417040 NUF2Q9BZD4 464 aa13.33□□□□□ -0.27
UBR4-205ENST00000417040 CSRNP2Q9H175 543 aa13.33□□□□□ -0.27
UBR4-205ENST00000417040 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
UBR4-205ENST00000417040 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 CALCRLQ16602 461 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 SH2D4BQ5SQS7 431 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 BSPRYQ5W0U4 402 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 ADALQ6DHV7 355 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 STX10O60499 249 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 E2F4Q16254 413 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 LIN9Q5TKA1 542 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 CEP128Q6ZU80 1094 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
UBR4-205ENST00000417040 SLC35F6Q8N357 371 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 ZNF532Q9HCE3 1301 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 FAM71BQ8TC56 605 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
UBR4-205ENST00000417040 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 PTPN22Q9Y2R2 807 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 HOXC9P31274 260 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 TRIM6Q9C030 488 aaPredicted RBP13.32□□□□□ -0.28
UBR4-205ENST00000417040 KDM5BQ9UGL1 1544 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 GAS8O95995 478 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 MSANTD4Q8NCY6 345 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 KRT12Q99456 494 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 EYA2O00167 538 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 GUCY2DQ02846 1103 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
UBR4-205ENST00000417040 APPBP2Q92624 585 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms