RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CYP2E1P05181 493 aaPredicted RBP12.25□□□□□ -0.45
MDC1-202ENST00000416571 TRIM27P14373 513 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 CNGA1P29973 690 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 PLA2G5P39877 138 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP5P45974 858 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP14P54578 494 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 USP17L24Q0WX57 530 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 LRRC26Q2I0M4 334 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 LHX8Q68G74 356 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 CERS3Q8IU89 383 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 EDC3Q96F86 508 aaKnown RBP12.25□□□□□ -0.45
MDC1-202ENST00000416571 SENP6Q9GZR1 1112 aaPredicted RBP12.25□□□□□ -0.45
MDC1-202ENST00000416571 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 MTMR10Q9NXD2 777 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
MDC1-202ENST00000416571 MSCO60682 206 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 IDH1O75874 414 aaKnown RBP12.24□□□□□ -0.45
MDC1-202ENST00000416571 CYP7A1P22680 504 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 ZAP70P43403 619 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 DYNLL1P63167 89 aaKnown RBP12.24□□□□□ -0.45
MDC1-202ENST00000416571 ATP2B2Q01814 1243 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 CABP5Q9NP86 173 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 SERPINB13Q9UIV8 391 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 NDUFB9Q9Y6M9 179 aa12.24□□□□□ -0.45
MDC1-202ENST00000416571 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
MDC1-202ENST00000416571 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
MDC1-202ENST00000416571 ABCB5Q2M3G0 1257 aa12.23□□□□□ -0.45
MDC1-202ENST00000416571 TTC6Q86TZ1 520 aa12.23□□□□□ -0.45
MDC1-202ENST00000416571 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
MDC1-202ENST00000416571 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
MDC1-202ENST00000416571 PIH1D3Q9NQM4 214 aaKnown RBP12.23□□□□□ -0.45
MDC1-202ENST00000416571 DDX20Q9UHI6 824 aaKnown RBP12.23□□□□□ -0.45
MDC1-202ENST00000416571 RAPGEFL1Q9UHV5 662 aa12.23□□□□□ -0.45
MDC1-202ENST00000416571 VCAM1P19320 739 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 PTPREP23469 700 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
MDC1-202ENST00000416571 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
MDC1-202ENST00000416571 TATDN1Q6P1N9 297 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 CATSPERGQ6ZRH7 1159 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.22□□□□□ -0.45
MDC1-202ENST00000416571 MAGEB6Q8N7X4 407 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 EHD4Q9H223 541 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
MDC1-202ENST00000416571 DNM1LO00429 736 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 BCAR3O75815 825 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 CNMDO75829 334 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 MAP3K12Q12852 859 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 POLA2Q14181 598 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 DPP9Q86TI2 863 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 TMEM57Q8N5G2 664 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 SSH3Q8TE77 659 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 LPAR1Q92633 364 aa12.21□□□□□ -0.45
MDC1-202ENST00000416571 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
MDC1-202ENST00000416571 RPAP3Q9H6T3 665 aaPredicted RBP12.21□□□□□ -0.45
MDC1-202ENST00000416571 MUC3AQ02505 3323 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 HOXC6P09630 235 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 HOXD11P31277 338 aaPredicted RBP12.2□□□□□ -0.46
MDC1-202ENST00000416571 CYP2C19P33261 490 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 GRB14Q14449 540 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 FAM109BQ6ICB4 259 aaPredicted RBP12.2□□□□□ -0.46
MDC1-202ENST00000416571 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 LBX2Q6XYB7 198 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 ARRDC4Q8NCT1 418 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 FLRT1Q9NZU1 646 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 DBNLQ9UJU6 430 aaKnown RBP12.2□□□□□ -0.46
MDC1-202ENST00000416571 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 CACNA1AO00555 2505 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
MDC1-202ENST00000416571 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 MPHOSPH10O00566 681 aaKnown RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 MYCNP04198 464 aaPredicted RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 POLR3DP05423 398 aaPredicted RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 RTP1P59025 263 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 NPLOC4Q8TAT6 608 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 FAM161BQ96MY7 647 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 SLC5A4Q9NY91 659 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 TLR7Q9NYK1 1049 aaKnown RBP12.19□□□□□ -0.46
MDC1-202ENST00000416571 BTBD7Q9P203 1132 aa12.19□□□□□ -0.46
MDC1-202ENST00000416571 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
MDC1-202ENST00000416571 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
MDC1-202ENST00000416571 CYBAP13498 195 aa12.18□□□□□ -0.46
MDC1-202ENST00000416571 COG2Q14746 738 aa12.18□□□□□ -0.46
MDC1-202ENST00000416571 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
MDC1-202ENST00000416571 EAF2Q96CJ1 260 aaPredicted RBP12.18□□□□□ -0.46
MDC1-202ENST00000416571 TANGO6Q9C0B7 1094 aa12.18□□□□□ -0.46
MDC1-202ENST00000416571 HOXC10Q9NYD6 342 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms