RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 DGKHQ86XP1 1220 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 TAF1DQ9H5J8 278 aaPredicted RBP11.47□□□□□ -0.57
PTPN12-203ENST00000415482 TBC1D12O60347 775 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 ADD1P35611 737 aaKnown RBP11.47□□□□□ -0.57
PTPN12-203ENST00000415482 NOVP48745 357 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 CCDC17Q96LX7 622 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 MTMR4Q9NYA4 1195 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
PTPN12-203ENST00000415482 PITPNM2Q9BZ72 1349 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 GOLGA8AA7E2F4 631 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 METAP2P50579 478 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTPN12-203ENST00000415482 TROAPQ12815 778 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 SEPT2Q15019 361 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
PTPN12-203ENST00000415482 RASGRP2Q7LDG7 609 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 NSUN7Q8NE18 718 aaKnown RBP11.46□□□□□ -0.57
PTPN12-203ENST00000415482 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
PTPN12-203ENST00000415482 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 FZD1Q9UP38 647 aa11.46□□□□□ -0.57
PTPN12-203ENST00000415482 MYH4Q9Y623 1939 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 PHF20L1A8MW92 1017 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 ADM5C9JUS6 153 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 GH2P01242 217 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 CCDC178Q5BJE1 867 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 SIAH1Q8IUQ4 282 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 SMC3Q9UQE7 1217 aa11.46□□□□□ -0.58
PTPN12-203ENST00000415482 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.46□□□□□ -0.58
PTPN12-203ENST00000415482 SSC5DA1L4H1 1573 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 NID2Q14112 1375 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 POTEJP0CG39 1038 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 GJB2P29033 226 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 PKP1Q13835 747 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 EAPPQ56P03 285 aaPredicted RBP11.45□□□□□ -0.58
PTPN12-203ENST00000415482 SYNE3Q6ZMZ3 975 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 FANCBQ8NB91 859 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 PNMA1Q8ND90 353 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 DCPSQ96C86 337 aaKnown RBP11.45□□□□□ -0.58
PTPN12-203ENST00000415482 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 KAT14Q9H8E8 782 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 CLIP2Q9UDT6 1046 aa11.45□□□□□ -0.58
PTPN12-203ENST00000415482 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 CMTR1Q8N1G2 835 aaKnown RBP11.44□□□□□ -0.58
PTPN12-203ENST00000415482 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
PTPN12-203ENST00000415482 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 ATAD5Q96QE3 1844 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 PTPDC1A2A3K4 754 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 DDAH1O94760 285 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 TOP1P11387 765 aaKnown RBP11.44□□□□□ -0.58
PTPN12-203ENST00000415482 CAP2P40123 477 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 NTRK3Q16288 839 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 RTN1Q16799 776 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 TMEM179Q6ZVK1 233 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
PTPN12-203ENST00000415482 LRRC47Q8N1G4 583 aaKnown RBP11.44□□□□□ -0.58
PTPN12-203ENST00000415482 TTLL1O95922 423 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 EEF2P13639 858 aaKnown RBP11.43□□□□□ -0.58
PTPN12-203ENST00000415482 FDPSP14324 419 aaKnown RBP11.43□□□□□ -0.58
PTPN12-203ENST00000415482 RCAN1P53805 252 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 ATP2B2Q01814 1243 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 USP48Q86UV5 1035 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 LLPHQ9BRT6 129 aaKnown RBP11.43□□□□□ -0.58
PTPN12-203ENST00000415482 KANSL2Q9H9L4 492 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 ZBTB21Q9ULJ3 1066 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 PPP2R3BQ9Y5P8 575 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 DCAF8L1A6NGE4 600 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 UBE2Q2LH0YL09 131 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 CPLX1O14810 134 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 CCDC84Q86UT8 332 aaPredicted RBP11.43□□□□□ -0.58
PTPN12-203ENST00000415482 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
PTPN12-203ENST00000415482 PHKBQ93100 1093 aa11.43□□□□□ -0.58
PTPN12-203ENST00000415482 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
PTPN12-203ENST00000415482 INPP5BP32019 993 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 ICA1Q05084 483 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 GLIS2Q9BZE0 524 aaPredicted RBP11.42□□□□□ -0.58
PTPN12-203ENST00000415482 CABP5Q9NP86 173 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 CHMP5Q9NZZ3 219 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 NYAP2Q9P242 653 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 ZDHHC9Q9Y397 364 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 A0A1W2PRG0 241 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 DHX16O60231 1041 aaKnown RBP11.42□□□□□ -0.58
PTPN12-203ENST00000415482 CALM1P0DP23 149 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 CALM2P0DP24 149 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 CALM3P0DP25 149 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 FUT2Q10981 343 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 PRKG1Q13976 671 aa11.42□□□□□ -0.58
PTPN12-203ENST00000415482 GRM4Q14833 912 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms