RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
RFFL-205ENST00000415395 IDI2Q9BXS1 227 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 ZMYND15Q9H091 742 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
RFFL-205ENST00000415395 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
RFFL-205ENST00000415395 SENP2Q9HC62 589 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 HDAC9Q9UKV0 1011 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
RFFL-205ENST00000415395 KIAA1524Q8TCG1 905 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 GMLQ99445 158 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
RFFL-205ENST00000415395 CLSTN2Q9H4D0 955 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 SPON1Q9HCB6 807 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
RFFL-205ENST00000415395 SWAP70Q9UH65 585 aa13.37□□□□□ -0.27
RFFL-205ENST00000415395 SAP30BPQ9UHR5 308 aaKnown RBP13.37□□□□□ -0.27
RFFL-205ENST00000415395 MYH6P13533 1939 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 H3BQV1 296 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 PSMD14O00487 310 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 CTAGE5O15320 804 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 IFNAR1P17181 557 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 CDK8P49336 464 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 RTN1Q16799 776 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 ATL3Q6DD88 541 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 DDX11Q96FC9 970 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 EHD4Q9H223 541 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 RBM28Q9NW13 759 aaKnown RBP13.36□□□□□ -0.27
RFFL-205ENST00000415395 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
RFFL-205ENST00000415395 TSPY3P0CV98 308 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 TSPY8P0CW00 308 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
RFFL-205ENST00000415395 RASA1P20936 1047 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
RFFL-205ENST00000415395 TFAP4Q01664 338 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 EVX2Q03828 476 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 GABPAQ06546 454 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 NTRK3Q16288 839 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 CDC37L1Q7L3B6 337 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 FANCBQ8NB91 859 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
RFFL-205ENST00000415395 FAM217BQ9NTX9 383 aaPredicted RBP13.36□□□□□ -0.27
RFFL-205ENST00000415395 BCS1LQ9Y276 419 aa13.36□□□□□ -0.27
RFFL-205ENST00000415395 NFKBIEO00221 500 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 CDC27P30260 824 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
RFFL-205ENST00000415395 PICALMQ13492 652 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 CFAP100Q494V2 611 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 FAM47AQ5JRC9 791 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
RFFL-205ENST00000415395 OGFOD1Q8N543 542 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 MTMR14Q8NCE2 650 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 BICD2Q8TD16 824 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 WASF1Q92558 559 aa13.35□□□□□ -0.27
RFFL-205ENST00000415395 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
RFFL-205ENST00000415395 DICER1Q9UPY3 1922 aaKnown RBP13.35□□□□□ -0.27
RFFL-205ENST00000415395 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 NEMFO60524 1076 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 ENTPD3O75355 529 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 RAD17O75943 681 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 CDC25BP30305 580 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 TROAPQ12815 778 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 TNIP1Q15025 636 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 NEDD1Q8NHV4 660 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
RFFL-205ENST00000415395 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
RFFL-205ENST00000415395 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
RFFL-205ENST00000415395 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.27
RFFL-205ENST00000415395 RPS12P25398 132 aaKnown RBP13.33□□□□□ -0.27
RFFL-205ENST00000415395 CXCL9Q07325 125 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.27
RFFL-205ENST00000415395 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 RCSD1Q6JBY9 416 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 RAB11FIP4Q86YS3 637 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 TRIM22Q8IYM9 498 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 C8orf76Q96K31 380 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 MYL10Q9BUA6 226 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 DACT1Q9NYF0 836 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.27
RFFL-205ENST00000415395 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 GOLGA6L19H0YKK7 550 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 RXRAP19793 462 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 NOVP48745 357 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 SYCP1Q15431 976 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms