RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 NBPF3Q9H094 633 aa19.54■□□□□ 0.72
LINC00398-201ENST00000414407 MYH8P13535 1937 aa19.54■□□□□ 0.72
LINC00398-201ENST00000414407 PLIN4Q96Q06 1357 aa19.54■□□□□ 0.72
LINC00398-201ENST00000414407 IGF2BP3O00425 579 aaKnown RBP eCLIP19.53■□□□□ 0.72
LINC00398-201ENST00000414407 MFSD6Q6ZSS7 791 aa19.53■□□□□ 0.72
LINC00398-201ENST00000414407 ANKRD23Q86SG2 305 aa19.53■□□□□ 0.72
LINC00398-201ENST00000414407 NEDD1Q8NHV4 660 aa19.53■□□□□ 0.72
LINC00398-201ENST00000414407 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.53■□□□□ 0.72
LINC00398-201ENST00000414407 KIAA1683Q9H0B3 1180 aa19.53■□□□□ 0.72
LINC00398-201ENST00000414407 RNF186Q9NXI6 227 aa19.53■□□□□ 0.72
LINC00398-201ENST00000414407 TACC3Q9Y6A5 838 aa19.53■□□□□ 0.72
LINC00398-201ENST00000414407 PCNTO95613 3336 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 IGKV6D-41A0A0C4DH26 115 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 BTBD19C9JJ37 291 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 USP14P54578 494 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 ICA1Q05084 483 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 MTMR2Q13614 643 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 PPP4R3BQ5MIZ7 849 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 TBC1D10CQ8IV04 446 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 SH2D4AQ9H788 454 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 ARHGEF10LQ9HCE6 1279 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 ANO2Q9NQ90 1003 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 SLC45A1Q9Y2W3 748 aa19.52■□□□□ 0.72
LINC00398-201ENST00000414407 TSPY3P0CV98 308 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 TSPY8P0CW00 308 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 HSPA1AP0DMV8 641 aaKnown RBP19.51■□□□□ 0.71
LINC00398-201ENST00000414407 HSPA1BP0DMV9 641 aaKnown RBP19.51■□□□□ 0.71
LINC00398-201ENST00000414407 TFAP4Q01664 338 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 USP17L2Q6R6M4 530 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 SIAH1Q8IUQ4 282 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 C12orf42Q96LP6 360 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 NYAP2Q9P242 653 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 GTF3C3Q9Y5Q9 886 aa19.51■□□□□ 0.71
LINC00398-201ENST00000414407 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
LINC00398-201ENST00000414407 GREB1LQ9C091 1923 aaPredicted RBP19.51■□□□□ 0.71
LINC00398-201ENST00000414407 TSPY2A6NKD2 308 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 TRPA1O75762 1119 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 CYP21A2P08686 494 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 HMGCS2P54868 508 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 GPAT2Q6NUI2 795 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 FAM43AQ8N2R8 423 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 ACER1Q8TDN7 264 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 FEZ1Q99689 392 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 CNNM2Q9H8M5 875 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 INCENPQ9NQS7 918 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 TMOD4Q9NZQ9 345 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 SYNPO2Q9UMS6 1093 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 AGTPBP1Q9UPW5 1226 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 TMX2Q9Y320 296 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 LAMA4Q16363 1823 aa19.5■□□□□ 0.71
LINC00398-201ENST00000414407 A0A1W2PRG0 241 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
LINC00398-201ENST00000414407 RANBP6O60518 1105 aaKnown RBP19.49■□□□□ 0.71
LINC00398-201ENST00000414407 FAM47AQ5JRC9 791 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 ESR2Q92731 530 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 KRT23Q9C075 422 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 TOMM22Q9NS69 142 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 EMILIN3Q9NT22 766 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 TCP11L1Q9NUJ3 509 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 MTMR4Q9NYA4 1195 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 PTPRFP10586 1907 aa19.49■□□□□ 0.71
LINC00398-201ENST00000414407 PDHXO00330 501 aa19.48■□□□□ 0.71
LINC00398-201ENST00000414407 REC8O95072 547 aa19.48■□□□□ 0.71
LINC00398-201ENST00000414407 EEF2P13639 858 aaKnown RBP19.48■□□□□ 0.71
LINC00398-201ENST00000414407 PABPC4Q13310 644 aaKnown RBP eCLIP19.48■□□□□ 0.71
LINC00398-201ENST00000414407 NECTIN1Q15223 517 aa19.48■□□□□ 0.71
LINC00398-201ENST00000414407 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
LINC00398-201ENST00000414407 MKL1Q969V6 931 aa19.48■□□□□ 0.71
LINC00398-201ENST00000414407 TTLL1O95922 423 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 HOXA7P31268 230 aaPredicted RBP19.47■□□□□ 0.71
LINC00398-201ENST00000414407 NOVP48745 357 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 RRP12Q5JTH9 1297 aaKnown RBP19.47■□□□□ 0.71
LINC00398-201ENST00000414407 CLEC10AQ8IUN9 316 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 LPAR1Q92633 364 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 CEP95Q96GE4 821 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 ZFYVE28Q9HCC9 887 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 NEDD4P46934 1319 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 LOC285556D6RIA3 1793 aa19.47■□□□□ 0.71
LINC00398-201ENST00000414407 FOXN1O15353 648 aa19.46■□□□□ 0.71
LINC00398-201ENST00000414407 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
LINC00398-201ENST00000414407 CTCFP49711 727 aaPredicted RBP19.46■□□□□ 0.71
LINC00398-201ENST00000414407 TRDNQ13061 729 aa19.46■□□□□ 0.71
LINC00398-201ENST00000414407 TAF1CQ15572 869 aaPredicted RBP19.46■□□□□ 0.71
LINC00398-201ENST00000414407 CCDC178Q5BJE1 867 aa19.46■□□□□ 0.71
LINC00398-201ENST00000414407 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
LINC00398-201ENST00000414407 IL17RBQ9NRM6 502 aa19.46■□□□□ 0.71
LINC00398-201ENST00000414407 PNMA3Q9UL41 463 aa19.46■□□□□ 0.71
LINC00398-201ENST00000414407 CRHR2Q13324 411 aa19.45■□□□□ 0.7
LINC00398-201ENST00000414407 TREML2Q5T2D2 321 aa19.45■□□□□ 0.7
LINC00398-201ENST00000414407 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
LINC00398-201ENST00000414407 TTC14Q96N46 770 aa19.45■□□□□ 0.7
LINC00398-201ENST00000414407 PARK7Q99497 189 aaKnown RBP19.45■□□□□ 0.7
LINC00398-201ENST00000414407 GOPCQ9HD26 462 aa19.45■□□□□ 0.7
LINC00398-201ENST00000414407 CLIP2Q9UDT6 1046 aa19.45■□□□□ 0.7
LINC00398-201ENST00000414407 E7EWF7 191 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 SLC27A2O14975 620 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 KDM4AO75164 1064 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 TBC1D8O95759 1140 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 HSPA8P11142 646 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms