RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 KRT5P13647 590 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 BLIDQ8IZY5 108 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 GUCA1BQ9UMX6 200 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 KCNJ14Q9UNX9 436 aa19.29■□□□□ 0.68
PHRF1-202ENST00000413872 TMEM110-MUSTN1A8MSY1 372 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 PHKA1P46020 1223 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 TNNC1P63316 161 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 PROSER3Q2NL68 480 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 CLEC4GQ6UXB4 293 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 KIAA1524Q8TCG1 905 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 IQCDQ96DY2 449 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 NAP1L3Q99457 506 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-202ENST00000413872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.28■□□□□ 0.68
PHRF1-202ENST00000413872 A0A1W2PRG0 241 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 PFKFB2O60825 505 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 SCNN1DP51172 638 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 LIN9Q5TKA1 542 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 MYCT1Q8N699 235 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 CSRNP2Q9H175 543 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 A2ML1A8K2U0 1454 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 POLR2MP0CAP2 368 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 JAKMIP2Q96AA8 810 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 BAG1Q99933 345 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-202ENST00000413872 KDM6BO15054 1643 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 TCP10L2B9ZVM9 353 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 FGAP02671 866 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 NT5C2P49902 561 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 SDR42E1Q8WUS8 393 aa19.28■□□□□ 0.68
PHRF1-202ENST00000413872 DYNC1I1O14576 645 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 FOSP01100 380 aaPredicted RBP19.27■□□□□ 0.68
PHRF1-202ENST00000413872 GRIPAP1Q4V328 841 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 FBXO11Q86XK2 927 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 SEPT12Q8IYM1 358 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 SLFN12Q8IYM2 578 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 IGSF22Q8N9C0 903 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 GOLGA1Q92805 767 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.27■□□□□ 0.688e-6■■■□□ 18.5
PHRF1-202ENST00000413872 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 DDX39AO00148 427 aaKnown RBP19.27■□□□□ 0.68
PHRF1-202ENST00000413872 POSTNQ15063 836 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 SEL1L2Q5TEA6 688 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 MYSM1Q5VVJ2 828 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 TRMT2AQ8IZ69 625 aaKnown RBP19.27■□□□□ 0.68
PHRF1-202ENST00000413872 ZSWIM6Q9HCJ5 1215 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 ZNF853P0CG23 659 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.68
PHRF1-202ENST00000413872 NLRP12P59046 1061 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 KIF22Q14807 665 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 KRT26Q7Z3Y9 468 aa19.27■□□□□ 0.68
PHRF1-202ENST00000413872 SLU7O95391 586 aaKnown RBP19.27■□□□□ 0.67
PHRF1-202ENST00000413872 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.67
PHRF1-202ENST00000413872 GPATCH4Q5T3I0 446 aaKnown RBP19.27■□□□□ 0.67
PHRF1-202ENST00000413872 MTRF1LQ9UGC7 380 aaKnown RBP19.27■□□□□ 0.67
PHRF1-202ENST00000413872 H0YCG3 227 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 MIER3Q7Z3K6 550 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 DHX37Q8IY37 1157 aaKnown RBP19.26■□□□□ 0.67
PHRF1-202ENST00000413872 OPA1O60313 960 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 XRCC6P12956 609 aaKnown RBP eCLIP19.26■□□□□ 0.67
PHRF1-202ENST00000413872 CCDC14Q49A88 953 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 CCDC84Q86UT8 332 aaPredicted RBP19.26■□□□□ 0.67
PHRF1-202ENST00000413872 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 EXOC3O60645 756 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 SCG2P13521 617 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 ZMYM1Q5SVZ6 1142 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 SLFN13Q68D06 897 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 NOSTRINQ8IVI9 506 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 ARHGEF16Q5VV41 709 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 PIGBQ92521 554 aa19.26■□□□□ 0.67
PHRF1-202ENST00000413872 JAK2O60674 1132 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 CCDC93Q567U6 631 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 CCDC122Q5T0U0 273 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 MAK16Q9BXY0 300 aaKnown RBP19.25■□□□□ 0.67
PHRF1-202ENST00000413872 OSBPL3Q9H4L5 887 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 GNA14O95837 355 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 GLG1Q92896 1179 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
PHRF1-202ENST00000413872 GSPT1P15170 499 aaKnown RBP19.25■□□□□ 0.67
PHRF1-202ENST00000413872 ALAS1P13196 640 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 ASIC2Q16515 512 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 ZNF569Q5MCW4 686 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 ZNF830Q96NB3 372 aaPredicted RBP19.25■□□□□ 0.67
PHRF1-202ENST00000413872 NUCKS1Q9H1E3 243 aaKnown RBP19.25■□□□□ 0.67
PHRF1-202ENST00000413872 VPS16Q9H269 839 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 MRPL44Q9H9J2 332 aaKnown RBP19.25■□□□□ 0.67
PHRF1-202ENST00000413872 GINS2Q9Y248 185 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
PHRF1-202ENST00000413872 ME3Q16798 604 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 SUPT20HL1Q3ZLR7 823 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 ERFEQ4G0M1 354 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 CDC37L1Q7L3B6 337 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 CYP26C1Q6V0L0 522 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 CEP128Q6ZU80 1094 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 PUS3Q9BZE2 481 aaKnown RBP19.24■□□□□ 0.67
PHRF1-202ENST00000413872 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
PHRF1-202ENST00000413872 NEK8Q86SG6 692 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 TICAM2Q86XR7 235 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 MLXIPQ9HAP2 919 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 POLR3GO15318 223 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 306 ms