RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 PEX10O60683 326 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 GJB1P08034 283 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 TSHZ3Q63HK5 1081 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 GTF3C2Q8WUA4 911 aaPredicted RBP20.24■□□□□ 0.83
COL6A2-205ENST00000413758 DYNLL2Q96FJ2 89 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 SWAP70Q9UH65 585 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 SLC4A4Q9Y6R1 1079 aa20.24■□□□□ 0.83
COL6A2-205ENST00000413758 DDX60LQ5H9U9 1706 aaKnown RBP20.24■□□□□ 0.83
COL6A2-205ENST00000413758 CENPFP49454 3210 aa20.23■□□□□ 0.83
COL6A2-205ENST00000413758 CHGBP05060 677 aa20.23■□□□□ 0.83
COL6A2-205ENST00000413758 GABPAQ06546 454 aa20.23■□□□□ 0.83
COL6A2-205ENST00000413758 SLC44A5Q8NCS7 719 aa20.23■□□□□ 0.83
COL6A2-205ENST00000413758 KIAA1683Q9H0B3 1180 aa20.23■□□□□ 0.83
COL6A2-205ENST00000413758 TXNRD2Q9NNW7 524 aa20.23■□□□□ 0.83
COL6A2-205ENST00000413758 MYH7P12883 1935 aa20.22■□□□□ 0.83
COL6A2-205ENST00000413758 GJA8P48165 433 aa20.22■□□□□ 0.83
COL6A2-205ENST00000413758 SHISA4Q96DD7 197 aa20.22■□□□□ 0.83
COL6A2-205ENST00000413758 C12orf42Q96LP6 360 aa20.22■□□□□ 0.83
COL6A2-205ENST00000413758 RBPJLQ9UBG7 517 aa20.22■□□□□ 0.83
COL6A2-205ENST00000413758 ZBTB47Q9UFB7 747 aaPredicted RBP20.22■□□□□ 0.83
COL6A2-205ENST00000413758 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
COL6A2-205ENST00000413758 DOCK3Q8IZD9 2030 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 CYP2D7A0A087X1C5 515 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 USP17L21D6R901 530 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
COL6A2-205ENST00000413758 VCAM1P19320 739 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 MAPK4P31152 587 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 GUCY1A2P33402 732 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 ERVK-9P63128 1117 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 ERVK-24P63145 666 aa20.21■□□□□ 0.83
COL6A2-205ENST00000413758 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
COL6A2-205ENST00000413758 PUS7LQ9H0K6 701 aaKnown RBP20.21■□□□□ 0.83
COL6A2-205ENST00000413758 CYP2B6P20813 491 aa20.2■□□□□ 0.82
COL6A2-205ENST00000413758 WDR78Q5VTH9 848 aa20.2■□□□□ 0.82
COL6A2-205ENST00000413758 CATSPERGQ6ZRH7 1159 aa20.2■□□□□ 0.82
COL6A2-205ENST00000413758 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
COL6A2-205ENST00000413758 DEFB118Q96PH6 123 aa20.2■□□□□ 0.82
COL6A2-205ENST00000413758 NUDT12Q9BQG2 462 aa20.2■□□□□ 0.82
COL6A2-205ENST00000413758 RPAP3Q9H6T3 665 aaPredicted RBP20.2■□□□□ 0.82
COL6A2-205ENST00000413758 BAZ2AQ9UIF9 1905 aaKnown RBP20.19■□□□□ 0.82
COL6A2-205ENST00000413758 HMGCRP04035 888 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 Q3C1V9 767 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 C12orf60Q5U649 245 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 KBTBD3Q8NAB2 608 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 DPF3Q92784 378 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 TANGO6Q9C0B7 1094 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 GJD2Q9UKL4 321 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 RABGAP1Q9Y3P9 1069 aa20.19■□□□□ 0.82
COL6A2-205ENST00000413758 ERC2O15083 957 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 FARP2O94887 1054 aaPredicted RBP20.18■□□□□ 0.82
COL6A2-205ENST00000413758 SGPL1O95470 568 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 AKR1B1P15121 316 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 CDK8P49336 464 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 CCNA1P78396 465 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 ATP2B2Q01814 1243 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 SOCS4Q8WXH5 440 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 GCC1Q96CN9 775 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 CRBNQ96SW2 442 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 PORCNQ9H237 461 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 ARHGEF10LQ9HCE6 1279 aa20.18■□□□□ 0.82
COL6A2-205ENST00000413758 MYH8P13535 1937 aa20.17■□□□□ 0.82
COL6A2-205ENST00000413758 RNF113AO15541 343 aaKnown RBP20.17■□□□□ 0.82
COL6A2-205ENST00000413758 ICA1Q05084 483 aa20.17■□□□□ 0.82
COL6A2-205ENST00000413758 LRRFIP1Q32MZ4 808 aaKnown RBP20.17■□□□□ 0.82
COL6A2-205ENST00000413758 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
COL6A2-205ENST00000413758 CCDC17Q96LX7 622 aa20.17■□□□□ 0.82
COL6A2-205ENST00000413758 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL6A2-205ENST00000413758 SH2D4AQ9H788 454 aa20.17■□□□□ 0.82
COL6A2-205ENST00000413758 A0A1W2PRG0 241 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 SMIM22K7EJ46 135 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 GLRX3O76003 335 aaKnown RBP20.16■□□□□ 0.82
COL6A2-205ENST00000413758 ZFYP08048 801 aaPredicted RBP20.16■□□□□ 0.82
COL6A2-205ENST00000413758 CTR9Q6PD62 1173 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
COL6A2-205ENST00000413758 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 GPR142Q7Z601 462 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 CLEC10AQ8IUN9 316 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 APPBP2Q92624 585 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 STRBPQ96SI9 672 aaKnown RBP20.16■□□□□ 0.82
COL6A2-205ENST00000413758 HTATIP2Q9BUP3 242 aa20.16■□□□□ 0.82
COL6A2-205ENST00000413758 HMX1Q9NP08 348 aaPredicted RBP20.16■□□□□ 0.82
COL6A2-205ENST00000413758 ARPP21Q9UBL0 812 aaPredicted RBP20.16■□□□□ 0.82
COL6A2-205ENST00000413758 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
COL6A2-205ENST00000413758 APPP05067 770 aa20.15■□□□□ 0.82
COL6A2-205ENST00000413758 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
COL6A2-205ENST00000413758 RGS2P41220 211 aa20.15■□□□□ 0.82
COL6A2-205ENST00000413758 TRIM32Q13049 653 aa20.15■□□□□ 0.82
COL6A2-205ENST00000413758 TTC41PQ6P2S7 1318 aa20.15■□□□□ 0.82
COL6A2-205ENST00000413758 SPDYE16A6NNV3 312 aaPredicted RBP20.14■□□□□ 0.81
COL6A2-205ENST00000413758 RAD21O60216 631 aa20.14■□□□□ 0.81
COL6A2-205ENST00000413758 CNMDO75829 334 aa20.14■□□□□ 0.81
COL6A2-205ENST00000413758 POTEEQ6S8J3 1075 aa20.14■□□□□ 0.81
COL6A2-205ENST00000413758 TRMT44Q8IYL2 757 aaKnown RBP20.14■□□□□ 0.81
COL6A2-205ENST00000413758 SPICE1Q8N0Z3 855 aa20.14■□□□□ 0.81
COL6A2-205ENST00000413758 OTUD7AQ8TE49 926 aaPredicted RBP20.14■□□□□ 0.81
COL6A2-205ENST00000413758 TRIB2Q92519 343 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms