RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LCA5Q86VQ0 697 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 TMEM151BQ8IW70 566 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 LILRB1Q8NHL6 650 aaPredicted RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 SNX27Q96L92 541 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 DNAJC5Q9H3Z4 198 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 PIDD1Q9HB75 910 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 IFT122Q9HBG6 1241 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 PAIP2BQ9ULR5 123 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 ASB3Q9Y575 518 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 ADGRB1O14514 1584 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 HALP42357 657 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 BRD3Q15059 726 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 OSTM1Q86WC4 334 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 EPC1Q9H2F5 836 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 TAOK3Q9H2K8 898 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 ZNF304Q9HCX3 659 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 DDX21Q9NR30 783 aaKnown RBP eCLIP5.86□□□□□ -1.47
HERC4-205ENST00000412272 KIAA1522Q9P206 1035 aaPredicted RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 ATXN10Q9UBB4 475 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 SWAP70Q9UH65 585 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 WWC3Q9ULE0 1092 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 KIAA0556O60303 1618 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 TROQ12816 1431 aaPredicted RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 NUP153P49790 1475 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 ERVK-7P63135 1459 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 HSPA8P11142 646 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 GSDMDP57764 484 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 GSTM4Q03013 218 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 CNGA3Q16281 694 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 NBPF14Q5TI25 921 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 PI16Q6UXB8 463 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 C3orf67Q6ZVT6 689 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 WDR75Q8IWA0 830 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 SAMD14Q8IZD0 417 aaPredicted RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 GBP7Q8N8V2 638 aaPredicted RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 SREK1Q8WXA9 508 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 PRAM1Q96QH2 718 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 PAGR1Q9BTK6 254 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 UPF3BQ9BZI7 483 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 OSBPL3Q9H4L5 887 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 VCPKMTQ9H867 229 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 SLC40A1Q9NP59 571 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 LUC7LQ9NQ29 371 aaKnown RBP5.86□□□□□ -1.47
HERC4-205ENST00000412272 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 ITSN1Q15811 1721 aa5.86□□□□□ -1.47
HERC4-205ENST00000412272 TMEM232C9JQI7 657 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 PPIDQ08752 370 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 FAM69CQ0P6D2 419 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CCDC40Q4G0X9 1142 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 TMEM53Q6P2H8 277 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 PLEKHM2Q8IWE5 1019 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 ZNF713Q8N859 430 aaPredicted RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 ANKRD24Q8TF21 1146 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 MAELQ96JY0 434 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 ATP6V1DQ9Y5K8 247 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 COL3A1P02461 1466 aaPredicted RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 CDK12Q9NYV4 1490 aaPredicted RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 SETBP1Q9Y6X0 1596 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CCDC151A5D8V7 595 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 SGTAO43765 313 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 RPL17P18621 184 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 DDB1Q16531 1140 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CCDC50Q8IVM0 306 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CCDC146Q8IYE0 955 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 NGDNQ8NEJ9 315 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 DEPTORQ8TB45 409 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 FAM71BQ8TC56 605 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 JAKMIP1Q96N16 626 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 NEK1Q96PY6 1258 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 NUP58Q9BVL2 599 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 ZNF644Q9H582 1327 aaPredicted RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 ZSCAN12O43309 604 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 KDM1AO60341 852 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 B3GALNT1O75752 331 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CSPG5O95196 566 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 SLC8A1P32418 973 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 PSMC4P43686 418 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 RASA2Q15283 850 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CCDC144BQ3MJ40 725 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 FCHSD1Q86WN1 690 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 CCDC144CPQ8IYA2 1237 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 KRI1Q8N9T8 703 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 NSMCE1Q8WV22 266 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 TOPBP1Q92547 1522 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 PPP2R3CQ969Q6 453 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 IWS1Q96ST2 819 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 FAM204AQ9H8W3 233 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 ANO10Q9NW15 660 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 ZNHIT6Q9NWK9 470 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 MAP3K5Q99683 1374 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 FAM25EA8MYX2 175 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 ZBTB7BO15156 539 aaPredicted RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 CDC25CP30307 473 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 PSMD7P51665 324 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 KIF11P52732 1056 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 RASSF7Q02833 373 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 LRRFIP1Q32MZ4 808 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
HERC4-205ENST00000412272 ZNF570Q96NI8 536 aa5.85□□□□□ -1.47
HERC4-205ENST00000412272 LNPEPQ9UIQ6 1025 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms