RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 NBPF3Q9H094 633 aa10.38□□□□□ -0.75
LINC02539-201ENST00000411615 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
LINC02539-201ENST00000411615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC02539-201ENST00000411615 SCAF8Q9UPN6 1271 aaKnown RBP10.38□□□□□ -0.75
LINC02539-201ENST00000411615 MYH8P13535 1937 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 SSC5DA1L4H1 1573 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 PHF20L1A8MW92 1017 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 E7EWF7 191 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 CTNND1O60716 968 aaKnown RBP10.37□□□□□ -0.75
LINC02539-201ENST00000411615 USP2O75604 605 aaPredicted RBP10.37□□□□□ -0.75
LINC02539-201ENST00000411615 HMGB1P09429 215 aaKnown RBP10.37□□□□□ -0.75
LINC02539-201ENST00000411615 SHMT1P34896 483 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 HAND2P61296 217 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 TRDNQ13061 729 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 TBC1D10CQ8IV04 446 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 ZNF444Q8N0Y2 327 aaPredicted RBP10.37□□□□□ -0.75
LINC02539-201ENST00000411615 NCOA7Q8NI08 942 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 KLRG1Q96E93 195 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 DNAJC18Q9H819 358 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 MKNK2Q9HBH9 465 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 SNX14Q9Y5W7 946 aa10.37□□□□□ -0.75
LINC02539-201ENST00000411615 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 SMIM22K7EJ46 135 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 RASA1P20936 1047 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 PSMA5P28066 241 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 CAP2P40123 477 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 IREB2P48200 963 aaKnown RBP10.36□□□□□ -0.75
LINC02539-201ENST00000411615 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
LINC02539-201ENST00000411615 CCDC178Q5BJE1 867 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 NOL9Q5SY16 702 aaKnown RBP10.36□□□□□ -0.75
LINC02539-201ENST00000411615 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 ESR2Q92731 530 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 TBC1D32Q96NH3 1257 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 NEK1Q96PY6 1258 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 TCP11L1Q9NUJ3 509 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 PAPPA2Q9BXP8 1791 aa10.36□□□□□ -0.75
LINC02539-201ENST00000411615 TRAF5O00463 557 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 ASNSP08243 561 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 LDLRAD1Q5T700 205 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 STOX1Q6ZVD7 989 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 TMEM179Q6ZVK1 233 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 MIGA2Q7L4E1 593 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 RALYLQ86SE5 291 aaKnown RBP10.35□□□□□ -0.75
LINC02539-201ENST00000411615 FBXL16Q8N461 479 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 C2orf69Q8N8R5 385 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC02539-201ENST00000411615 NEDD1Q8NHV4 660 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
LINC02539-201ENST00000411615 TBC1D2Q9BYX2 928 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 TACC3Q9Y6A5 838 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 PLIN4Q96Q06 1357 aa10.35□□□□□ -0.75
LINC02539-201ENST00000411615 CELF2O95319 508 aaKnown RBP10.34□□□□□ -0.75
LINC02539-201ENST00000411615 MCM5P33992 734 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 NOVP48745 357 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 TFAP4Q01664 338 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 ABCB5Q2M3G0 1257 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 SLC4A8Q2Y0W8 1093 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 CST9Q5W186 159 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 DLK2Q6UY11 383 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 DHX32Q7L7V1 743 aaKnown RBP10.34□□□□□ -0.75
LINC02539-201ENST00000411615 MB21D2Q8IYB1 491 aaPredicted RBP10.34□□□□□ -0.75
LINC02539-201ENST00000411615 ANKRD13AQ8IZ07 590 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 TTC14Q96N46 770 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 GBA2Q9HCG7 927 aaPredicted RBP10.34□□□□□ -0.75
LINC02539-201ENST00000411615 CABP5Q9NP86 173 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 INCENPQ9NQS7 918 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 SYNPO2Q9UMS6 1093 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 TAF6LQ9Y6J9 622 aa10.34□□□□□ -0.75
LINC02539-201ENST00000411615 GREB1LQ9C091 1923 aaPredicted RBP10.34□□□□□ -0.75
LINC02539-201ENST00000411615 NEDD4P46934 1319 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 IGKV6D-41A0A0C4DH26 115 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 TSPY2A6NKD2 308 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 B4E1Z4 1266 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 RANBP6O60518 1105 aaKnown RBP10.33□□□□□ -0.76
LINC02539-201ENST00000411615 KDM4AO75164 1064 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 PRDM1O75626 825 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 TSPY3P0CV98 308 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 TSPY8P0CW00 308 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 EXOSC10Q01780 885 aaKnown RBP10.33□□□□□ -0.76
LINC02539-201ENST00000411615 RRP1BQ14684 758 aaKnown RBP10.33□□□□□ -0.76
LINC02539-201ENST00000411615 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
LINC02539-201ENST00000411615 PPP1R15BQ5SWA1 713 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 BLOC1S2Q6QNY1 142 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.33□□□□□ -0.76
LINC02539-201ENST00000411615 RUFY3Q7L099 469 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 IQCA1Q86XH1 822 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 DGKHQ86XP1 1220 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 SCYL3Q8IZE3 742 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 TMTC2Q8N394 836 aa10.33□□□□□ -0.76
LINC02539-201ENST00000411615 ANKS1AQ92625 1134 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms