RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 LHX8Q68G74 356 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 TATDN1Q6P1N9 297 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 MAGEB6Q8N7X4 407 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 APBA2Q99767 749 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 SERPINB13Q9UIV8 391 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 RABGAP1Q9Y3P9 1069 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 NDUFB9Q9Y6M9 179 aa17.38■□□□□ 0.37
HLA-DQB2-229ENST00000411527 DLL1O00548 723 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 CNMDO75829 334 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 COL6A1P12109 1028 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 USP14P54578 494 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 CCNA1P78396 465 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 MAP2K5Q13163 448 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 CERS3Q8IU89 383 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 TDHQ8IZJ6 230 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 EDC3Q96F86 508 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 UBE2OQ9C0C9 1292 aaKnown RBP17.37■□□□□ 0.37
HLA-DQB2-229ENST00000411527 GLRX3O76003 335 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 ABCB5Q2M3G0 1257 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 LRIT3Q3SXY7 679 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 CERKLQ49MI3 558 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 GPR153Q6NV75 609 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 CATSPERGQ6ZRH7 1159 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 TTC6Q86TZ1 520 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 EHD4Q9H223 541 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
HLA-DQB2-229ENST00000411527 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 MAP3K12Q12852 859 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 LRRC26Q2I0M4 334 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 MFSD14CQ5VZR4 134 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 ACER1Q8TDN7 264 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 CABP5Q9NP86 173 aa17.35■□□□□ 0.37
HLA-DQB2-229ENST00000411527 SLC15A5A6NIM6 579 aa17.34■□□□□ 0.37
HLA-DQB2-229ENST00000411527 VCAM1P19320 739 aa17.34■□□□□ 0.37
HLA-DQB2-229ENST00000411527 FRMPD3Q5JV73 1810 aa17.34■□□□□ 0.37
HLA-DQB2-229ENST00000411527 Q7L0L9 218 aa17.34■□□□□ 0.37
HLA-DQB2-229ENST00000411527 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
HLA-DQB2-229ENST00000411527 PTPREP23469 700 aa17.33■□□□□ 0.36
HLA-DQB2-229ENST00000411527 PLCD1P51178 756 aa17.33■□□□□ 0.36
HLA-DQB2-229ENST00000411527 ATP2B2Q01814 1243 aa17.33■□□□□ 0.36
HLA-DQB2-229ENST00000411527 BTBD7Q9P203 1132 aa17.33■□□□□ 0.36
HLA-DQB2-229ENST00000411527 IVNS1ABPQ9Y6Y0 642 aa17.33■□□□□ 0.36
HLA-DQB2-229ENST00000411527 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 RLBP1P12271 317 aa17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 CNGA1P29973 690 aa17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 SHMT1P34896 483 aa17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MDM2Q00987 491 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 TMED8Q6PL24 325 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 LBX2Q6XYB7 198 aa17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 AACSQ86V21 672 aa17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 RPAP3Q9H6T3 665 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB2-229ENST00000411527 COL6A3P12111 3177 aa17.31■□□□□ 0.36
HLA-DQB2-229ENST00000411527 SPDYE16A6NNV3 312 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB2-229ENST00000411527 SEPT2Q15019 361 aa17.31■□□□□ 0.36
HLA-DQB2-229ENST00000411527 NPLOC4Q8TAT6 608 aa17.31■□□□□ 0.36
HLA-DQB2-229ENST00000411527 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB2-229ENST00000411527 EXOC6BQ9Y2D4 811 aa17.31■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MAGEB6P1A0A0J9YX57 407 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 HOXC6P09630 235 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 CYP2C19P33261 490 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 GRB14Q14449 540 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MTMR10Q9NXD2 777 aa17.3■□□□□ 0.36
HLA-DQB2-229ENST00000411527 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MSCO60682 206 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 SLC9C2Q5TAH2 1124 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 LPAR1Q92633 364 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 IL1RAPL2Q9NP60 686 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 HOXC10Q9NYD6 342 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 STXBP5LQ9Y2K9 1186 aa17.29■□□□□ 0.36
HLA-DQB2-229ENST00000411527 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 EVX2Q03828 476 aa17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 GABPAQ06546 454 aa17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 COG2Q14746 738 aa17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 DPP9Q86TI2 863 aa17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 TRPV1Q8NER1 839 aa17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
HLA-DQB2-229ENST00000411527 A0A1W2PRG0 241 aa17.27■□□□□ 0.36
HLA-DQB2-229ENST00000411527 PDE6AP16499 860 aa17.27■□□□□ 0.36
HLA-DQB2-229ENST00000411527 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.36
HLA-DQB2-229ENST00000411527 TANGO6Q9C0B7 1094 aa17.27■□□□□ 0.36
HLA-DQB2-229ENST00000411527 DNM1LO00429 736 aa17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 STRNO43815 780 aa17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ADORA2AP29274 412 aa17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 HSP90AB4PQ58FF6 505 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms