RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 GPR153Q6NV75 609 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 POTEEQ6S8J3 1075 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 EAF2Q96CJ1 260 aaPredicted RBP20.36■□□□□ 0.85
MRPL55-220ENST00000411464 EDC3Q96F86 508 aaKnown RBP20.36■□□□□ 0.85
MRPL55-220ENST00000411464 C12orf42Q96LP6 360 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 EHD4Q9H223 541 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 CABP5Q9NP86 173 aa20.36■□□□□ 0.85
MRPL55-220ENST00000411464 PFASO15067 1338 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 MAP2K5Q13163 448 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 ABCB5Q2M3G0 1257 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 WDR78Q5VTH9 848 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 LHX8Q68G74 356 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 TMED8Q6PL24 325 aaPredicted RBP20.35■□□□□ 0.85
MRPL55-220ENST00000411464 CATSPERGQ6ZRH7 1159 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 ITPRIPQ8IWB1 547 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 TDHQ8IZJ6 230 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 UBE2OQ9C0C9 1292 aaKnown RBP20.35■□□□□ 0.85
MRPL55-220ENST00000411464 KIAA1683Q9H0B3 1180 aa20.35■□□□□ 0.85
MRPL55-220ENST00000411464 DLL1O00548 723 aa20.34■□□□□ 0.85
MRPL55-220ENST00000411464 COL6A1P12109 1028 aa20.34■□□□□ 0.85
MRPL55-220ENST00000411464 LRIT3Q3SXY7 679 aa20.34■□□□□ 0.85
MRPL55-220ENST00000411464 MFSD14CQ5VZR4 134 aa20.34■□□□□ 0.85
MRPL55-220ENST00000411464 DEFB123Q8N688 67 aa20.34■□□□□ 0.85
MRPL55-220ENST00000411464 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.85
MRPL55-220ENST00000411464 IVNS1ABPQ9Y6Y0 642 aa20.33■□□□□ 0.85
MRPL55-220ENST00000411464 LAMA3Q16787 3333 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 ATAD5Q96QE3 1844 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 SLC15A5A6NIM6 579 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 CNMDO75829 334 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 VCAM1P19320 739 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 PTPREP23469 700 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 ATP2B2Q01814 1243 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 ACER1Q8TDN7 264 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
MRPL55-220ENST00000411464 POLR3DP05423 398 aaPredicted RBP20.31■□□□□ 0.84
MRPL55-220ENST00000411464 LRRC26Q2I0M4 334 aa20.31■□□□□ 0.84
MRPL55-220ENST00000411464 AACSQ86V21 672 aa20.31■□□□□ 0.84
MRPL55-220ENST00000411464 ERC1Q8IUD2 1116 aa20.31■□□□□ 0.84
MRPL55-220ENST00000411464 CNGA1P29973 690 aa20.3■□□□□ 0.84
MRPL55-220ENST00000411464 PLCD1P51178 756 aa20.3■□□□□ 0.84
MRPL55-220ENST00000411464 LBX2Q6XYB7 198 aa20.3■□□□□ 0.84
MRPL55-220ENST00000411464 SENP6Q9GZR1 1112 aaPredicted RBP20.3■□□□□ 0.84
MRPL55-220ENST00000411464 RPAP3Q9H6T3 665 aaPredicted RBP20.3■□□□□ 0.84
MRPL55-220ENST00000411464 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
MRPL55-220ENST00000411464 MAGEB6P1A0A0J9YX57 407 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 MSCO60682 206 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 HOXC6P09630 235 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 RLBP1P12271 317 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 SHMT1P34896 483 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 TTF1Q15361 905 aaPredicted RBP20.29■□□□□ 0.84
MRPL55-220ENST00000411464 CEP85Q6P2H3 762 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 Q7L0L9 218 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 FLRT1Q9NZU1 646 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 BTBD7Q9P203 1132 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 DDX20Q9UHI6 824 aaKnown RBP20.29■□□□□ 0.84
MRPL55-220ENST00000411464 EXOC6BQ9Y2D4 811 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 A0A0C4DFX4 3053 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 MAST2Q6P0Q8 1798 aa20.29■□□□□ 0.84
MRPL55-220ENST00000411464 COL6A3P12111 3177 aa20.28■□□□□ 0.84
MRPL55-220ENST00000411464 MDM2Q00987 491 aaPredicted RBP20.28■□□□□ 0.84
MRPL55-220ENST00000411464 GRB14Q14449 540 aa20.28■□□□□ 0.84
MRPL55-220ENST00000411464 RIOK1Q9BRS2 568 aaKnown RBP20.28■□□□□ 0.84
MRPL55-220ENST00000411464 CRNKL1Q9BZJ0 848 aaKnown RBP20.28■□□□□ 0.84
MRPL55-220ENST00000411464 HOXC10Q9NYD6 342 aa20.28■□□□□ 0.84
MRPL55-220ENST00000411464 PLXNB2O15031 1838 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 SPDYE16A6NNV3 312 aaPredicted RBP20.27■□□□□ 0.84
MRPL55-220ENST00000411464 MPHOSPH10O00566 681 aaKnown RBP20.27■□□□□ 0.84
MRPL55-220ENST00000411464 GUCY1A2P33402 732 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 COG2Q14746 738 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 SEPT2Q15019 361 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 HSP90AB4PQ58FF6 505 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 SLC9C2Q5TAH2 1124 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 DPP9Q86TI2 863 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 LPAR1Q92633 364 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 LBHD1Q9BQE6 289 aaPredicted RBP20.27■□□□□ 0.84
MRPL55-220ENST00000411464 MCM9Q9NXL9 1143 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 STXBP5LQ9Y2K9 1186 aa20.27■□□□□ 0.84
MRPL55-220ENST00000411464 DDX60LQ5H9U9 1706 aaKnown RBP20.27■□□□□ 0.83
MRPL55-220ENST00000411464 CYP2C19P33261 490 aa20.26■□□□□ 0.83
MRPL55-220ENST00000411464 NPLOC4Q8TAT6 608 aa20.26■□□□□ 0.83
MRPL55-220ENST00000411464 IL1RAPL2Q9NP60 686 aa20.26■□□□□ 0.83
MRPL55-220ENST00000411464 MTMR10Q9NXD2 777 aa20.26■□□□□ 0.83
MRPL55-220ENST00000411464 STRNO43815 780 aa20.25■□□□□ 0.83
MRPL55-220ENST00000411464 GABPAQ06546 454 aa20.25■□□□□ 0.83
MRPL55-220ENST00000411464 TANGO6Q9C0B7 1094 aa20.25■□□□□ 0.83
MRPL55-220ENST00000411464 ALPK3Q96L96 1907 aa20.25■□□□□ 0.83
MRPL55-220ENST00000411464 DNM1LO00429 736 aa20.24■□□□□ 0.83
MRPL55-220ENST00000411464 PDE6AP16499 860 aa20.24■□□□□ 0.83
MRPL55-220ENST00000411464 ATN1P54259 1190 aaPredicted RBP20.24■□□□□ 0.83
MRPL55-220ENST00000411464 MOV10L1Q9BXT6 1211 aaKnown RBP20.24■□□□□ 0.83
MRPL55-220ENST00000411464 PRKAG2Q9UGJ0 569 aa20.24■□□□□ 0.83
MRPL55-220ENST00000411464 A0A1W2PRG0 241 aa20.23■□□□□ 0.83
MRPL55-220ENST00000411464 ADORA2AP29274 412 aa20.23■□□□□ 0.83
MRPL55-220ENST00000411464 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
MRPL55-220ENST00000411464 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
MRPL55-220ENST00000411464 ARRDC4Q8NCT1 418 aa20.23■□□□□ 0.83
MRPL55-220ENST00000411464 RHPN1Q8TCX5 695 aa20.23■□□□□ 0.83
MRPL55-220ENST00000411464 ZNF532Q9HCE3 1301 aa20.23■□□□□ 0.83
MRPL55-220ENST00000411464 OLFML2BQ68BL8 750 aa20.22■□□□□ 0.83
MRPL55-220ENST00000411464 TMEM179Q6ZVK1 233 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms