RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 CDC27P30260 824 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 IL15P40933 162 aaPredicted RBP3.6□□□□□ -1.83
CUL3-204ENST00000409777 ME1P48163 572 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 PPP2R3AQ06190 1150 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 SF3B2Q13435 895 aaKnown RBP3.6□□□□□ -1.83
CUL3-204ENST00000409777 CUL4BQ13620 913 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 ALX1Q15699 326 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 TEX35Q5T0J7 233 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 MPRIPQ6WCQ1 1025 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 ZNF572Q7Z3I7 529 aaPredicted RBP3.6□□□□□ -1.83
CUL3-204ENST00000409777 SRGAP1Q7Z6B7 1085 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 SRLQ86TD4 932 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 ABTB2Q8N961 1025 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 KLHDC4Q8TBB5 520 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 ZNF592Q92610 1267 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 CARD6Q9BX69 1037 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 NCOA5Q9HCD5 579 aaKnown RBP3.6□□□□□ -1.83
CUL3-204ENST00000409777 KIF13BQ9NQT8 1826 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 DUOX1Q9NRD9 1551 aa3.6□□□□□ -1.83
CUL3-204ENST00000409777 ACTN4O43707 911 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 DHX16O60231 1041 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 PRPF6O94906 941 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 SEC31AO94979 1220 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 CLSTN1O94985 981 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 NUDT7P0C024 238 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 KCNA6P17658 529 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 COL9A1P20849 921 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 ACTN2P35609 894 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 LONRF2Q1L5Z9 754 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 SPECC1LQ69YQ0 1117 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 TOGARAM2Q6ZUX3 1019 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 STK11IPQ8N1F8 1099 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 MLKLQ8NB16 471 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 GIPC2Q8TF65 315 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 XAGE3Q8WTP9 111 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 SPIRE2Q8WWL2 714 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 GOLGA1Q92805 767 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 OSBP2Q969R2 916 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 CCDC51Q96ER9 411 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 TEX13AQ9BXU3 409 aaPredicted RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 MRPL44Q9H9J2 332 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 HMX1Q9NP08 348 aaPredicted RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 MYO1AQ9UBC5 1043 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 FBXO2Q9UK22 296 aaPredicted RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 MAN1B1Q9UKM7 699 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 EID1Q9Y6B2 187 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 ITGB4P16144 1822 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 XIRP1Q702N8 1843 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 ZNF831Q5JPB2 1677 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 DCCP43146 1447 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 NUP98P52948 1817 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 MYH8P13535 1937 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 SMC2O95347 1197 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 PHKG2P15735 406 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 PTPREP23469 700 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 ARHGAP25P42331 645 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 UBASH3AP57075 661 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 FMR1Q06787 632 aaKnown RBP eCLIP3.59□□□□□ -1.83
CUL3-204ENST00000409777 STK38Q15208 465 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 CTR9Q6PD62 1173 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 ANKRD13DQ6ZTN6 518 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 STK32AQ8WU08 396 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 RUBCNQ92622 972 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 C8orf76Q96K31 380 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 GJD4Q96KN9 370 aaPredicted RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 SLC26A8Q96RN1 970 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 BAG1Q99933 345 aaPredicted RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 ARFGAP3Q9NP61 516 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 CDC23Q9UJX2 597 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 ADAM21Q9UKJ8 722 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 TNRC6CQ9HCJ0 1690 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 SETD1BQ9UPS6 1966 aaKnown RBP3.59□□□□□ -1.83
CUL3-204ENST00000409777 TNS3Q68CZ2 1445 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 UBN2Q6ZU65 1347 aa3.59□□□□□ -1.83
CUL3-204ENST00000409777 CACNA1SQ13698 1873 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 TCRBV5S4A2TA0A5A2 114 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 MYO1CO00159 1063 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 EYA2O00167 538 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 NRDCO43847 1150 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 RANBP6O60518 1105 aaKnown RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 CASQ1P31415 396 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 SYKP43405 635 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 TOB1P50616 345 aaPredicted RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 PLCD1P51178 756 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 NEXNQ0ZGT2 675 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 TRIM28Q13263 835 aaKnown RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 ZSCAN26Q16670 478 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 WHAMMP3Q1A5X7 153 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 LONRF3Q496Y0 759 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 EMC10Q5UCC4 262 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 RIC3Q7Z5B4 369 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 NEK11Q8NG66 645 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 NKX2-3Q8TAU0 364 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 IGDCC4Q8TDY8 1250 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 ERCC4Q92889 916 aaPredicted RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 LRRC59Q96AG4 307 aaKnown RBP3.59□□□□□ -1.84
CUL3-204ENST00000409777 DHX58Q96C10 678 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 PNKPQ96T60 521 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 SDF4Q9BRK5 362 aa3.59□□□□□ -1.84
CUL3-204ENST00000409777 LRRC2Q9BYS8 371 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms