RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NSUN7Q8NE18 718 aaKnown RBP18.29■□□□□ 0.52
SHANK2-204ENST00000409530 NEDD1Q8NHV4 660 aa18.29■□□□□ 0.52
SHANK2-204ENST00000409530 MYH4Q9Y623 1939 aa18.29■□□□□ 0.52
SHANK2-204ENST00000409530 DDIT3P35638 169 aa18.29■□□□□ 0.52
SHANK2-204ENST00000409530 RRP1BQ14684 758 aaKnown RBP18.29■□□□□ 0.52
SHANK2-204ENST00000409530 RTN1Q16799 776 aa18.29■□□□□ 0.52
SHANK2-204ENST00000409530 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
SHANK2-204ENST00000409530 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
SHANK2-204ENST00000409530 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.29■□□□□ 0.52
SHANK2-204ENST00000409530 ADARB2Q9NS39 739 aaKnown RBP18.29■□□□□ 0.52
SHANK2-204ENST00000409530 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
SHANK2-204ENST00000409530 COL2A1P02458 1487 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-204ENST00000409530 VPS37CA5D8V6 355 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-204ENST00000409530 EVCP57679 992 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 PRKG1Q13976 671 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 ZNF526Q8TF50 670 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-204ENST00000409530 PIBF1Q8WXW3 757 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 TMEM47Q9BQJ4 181 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 GH2P01242 217 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 JAG1P78504 1218 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 SEPT2Q15019 361 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 ABCB5Q2M3G0 1257 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-204ENST00000409530 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 FOXP4Q8IVH2 680 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-204ENST00000409530 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
SHANK2-204ENST00000409530 GLTPD2A6NH11 291 aa18.27■□□□□ 0.52
SHANK2-204ENST00000409530 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
SHANK2-204ENST00000409530 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
SHANK2-204ENST00000409530 TMTC2Q8N394 836 aa18.27■□□□□ 0.52
SHANK2-204ENST00000409530 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.52
SHANK2-204ENST00000409530 CLIP2Q9UDT6 1046 aa18.27■□□□□ 0.52
SHANK2-204ENST00000409530 hCG_1642624A0A1W2PR95 340 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 ADM5C9JUS6 153 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 PLEKHA8P1O95397 391 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 APOBEC3FQ8IUX4 373 aaKnown RBP18.26■□□□□ 0.51
SHANK2-204ENST00000409530 GOLGA8HP0CJ92 632 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 EPHX2P34913 555 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 MMP14P50281 582 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 GUCY1B3Q02153 619 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 FANCBQ8NB91 859 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 MTA3Q9BTC8 594 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 SLC26A6Q9BXS9 759 aa18.26■□□□□ 0.51
SHANK2-204ENST00000409530 HERC5Q9UII4 1024 aaKnown RBP18.26■□□□□ 0.51
SHANK2-204ENST00000409530 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
SHANK2-204ENST00000409530 DHX16O60231 1041 aaKnown RBP18.25■□□□□ 0.51
SHANK2-204ENST00000409530 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 CTCFLQ8NI51 663 aaPredicted RBP18.25■□□□□ 0.51
SHANK2-204ENST00000409530 CHAMP1Q96JM3 812 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 FAM217BQ9NTX9 383 aaPredicted RBP18.25■□□□□ 0.51
SHANK2-204ENST00000409530 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 ATAD5Q96QE3 1844 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 PLIN4Q96Q06 1357 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 SYT1P21579 422 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 ICA1Q05084 483 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 TROAPQ12815 778 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 LARP1BQ659C4 914 aaKnown RBP18.25■□□□□ 0.51
SHANK2-204ENST00000409530 AIFM3Q96NN9 605 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 CPVLQ9H3G5 476 aa18.25■□□□□ 0.51
SHANK2-204ENST00000409530 BAZ2BQ9UIF8 2168 aaKnown RBP18.24■□□□□ 0.51
SHANK2-204ENST00000409530 DCPSQ96C86 337 aaKnown RBP18.24■□□□□ 0.51
SHANK2-204ENST00000409530 CABP5Q9NP86 173 aa18.24■□□□□ 0.51
SHANK2-204ENST00000409530 GJB4Q9NTQ9 266 aa18.24■□□□□ 0.51
SHANK2-204ENST00000409530 TCP11L1Q9NUJ3 509 aa18.24■□□□□ 0.51
SHANK2-204ENST00000409530 ORC3Q9UBD5 711 aaPredicted RBP18.24■□□□□ 0.51
SHANK2-204ENST00000409530 FRMPD2Q68DX3 1309 aaPredicted RBP18.24■□□□□ 0.51
SHANK2-204ENST00000409530 DDAH1O94760 285 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 TTLL1O95922 423 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 EEF2P13639 858 aaKnown RBP18.23■□□□□ 0.51
SHANK2-204ENST00000409530 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
SHANK2-204ENST00000409530 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 CCDC17Q96LX7 622 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 PGAP2Q9UHJ9 254 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 MYH6P13533 1939 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 ZYXQ15942 572 aaKnown RBP18.23■□□□□ 0.51
SHANK2-204ENST00000409530 STAG2Q8N3U4 1231 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 SMARCC2Q8TAQ2 1214 aa18.23■□□□□ 0.51
SHANK2-204ENST00000409530 L3MBTL3Q96JM7 780 aaPredicted RBP18.23■□□□□ 0.51
SHANK2-204ENST00000409530 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
SHANK2-204ENST00000409530 STX6O43752 255 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 POTEIP0CG38 1075 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 POTEJP0CG39 1038 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
SHANK2-204ENST00000409530 CCDC178Q5BJE1 867 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 OTUD7BQ6GQQ9 843 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 USP17L2Q6R6M4 530 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 TMEM179Q6ZVK1 233 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 CDC37L1Q7L3B6 337 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 SULF1Q8IWU6 871 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
SHANK2-204ENST00000409530 LLPHQ9BRT6 129 aaKnown RBP18.22■□□□□ 0.51
SHANK2-204ENST00000409530 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 ZDHHC9Q9Y397 364 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 USP17L5A8MUK1 530 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 H3BQV1 296 aa18.22■□□□□ 0.51
SHANK2-204ENST00000409530 FDPSP14324 419 aaKnown RBP18.22■□□□□ 0.51
SHANK2-204ENST00000409530 GUCY1A2P33402 732 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms