RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 FASTKD5Q7L8L6 764 aaKnown RBP17.54■□□□□ 0.4
SUMO1-207ENST00000409498 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
SUMO1-207ENST00000409498 NEDD1Q8NHV4 660 aa17.54■□□□□ 0.4
SUMO1-207ENST00000409498 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
SUMO1-207ENST00000409498 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
SUMO1-207ENST00000409498 USP17L10C9JJH3 530 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 IGF2BP3O00425 579 aaKnown RBP eCLIP17.53■□□□□ 0.4
SUMO1-207ENST00000409498 EPB41L2O43491 1005 aaKnown RBP17.53■□□□□ 0.4
SUMO1-207ENST00000409498 PRDM1O75626 825 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 NOVP48745 357 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 RAB3GAP1Q15042 981 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 OTUD7BQ6GQQ9 843 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 ANKRD23Q86SG2 305 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 TBC1D10CQ8IV04 446 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
SUMO1-207ENST00000409498 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 KIAA1683Q9H0B3 1180 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 LOC285556D6RIA3 1793 aa17.53■□□□□ 0.4
SUMO1-207ENST00000409498 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 MPHOSPH10O00566 681 aaKnown RBP17.52■□□□□ 0.4
SUMO1-207ENST00000409498 HAND2P61296 217 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 INCENPQ9NQS7 918 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
SUMO1-207ENST00000409498 RNF186Q9NXI6 227 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
SUMO1-207ENST00000409498 A0A1W2PRG0 241 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 BTBD19C9JJ37 291 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 CYP21A2P08686 494 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 USP14P54578 494 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 TFAP4Q01664 338 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 NECTIN1Q15223 517 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 FAM43AQ8N2R8 423 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 MKL1Q969V6 931 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 TCP11L1Q9NUJ3 509 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 SYNPO2Q9UMS6 1093 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 TMX2Q9Y320 296 aa17.51■□□□□ 0.39
SUMO1-207ENST00000409498 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
SUMO1-207ENST00000409498 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 ICA1Q05084 483 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 MTMR2Q13614 643 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
SUMO1-207ENST00000409498 PPP4R3BQ5MIZ7 849 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 ACER1Q8TDN7 264 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 EMILIN3Q9NT22 766 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 MTMR4Q9NYA4 1195 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 AGTPBP1Q9UPW5 1226 aa17.5■□□□□ 0.39
SUMO1-207ENST00000409498 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
SUMO1-207ENST00000409498 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
SUMO1-207ENST00000409498 EEF2P13639 858 aaKnown RBP17.49■□□□□ 0.39
SUMO1-207ENST00000409498 HOXA7P31268 230 aaPredicted RBP17.49■□□□□ 0.39
SUMO1-207ENST00000409498 HMGCS2P54868 508 aa17.49■□□□□ 0.39
SUMO1-207ENST00000409498 FAM47AQ5JRC9 791 aa17.49■□□□□ 0.39
SUMO1-207ENST00000409498 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
SUMO1-207ENST00000409498 CNNM2Q9H8M5 875 aa17.49■□□□□ 0.39
SUMO1-207ENST00000409498 ARHGEF10LQ9HCE6 1279 aa17.49■□□□□ 0.39
SUMO1-207ENST00000409498 TSPY2A6NKD2 308 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 ESR2Q92731 530 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 KRT23Q9C075 422 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
SUMO1-207ENST00000409498 NEDD4P46934 1319 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 PDHXO00330 501 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
SUMO1-207ENST00000409498 TRPA1O75762 1119 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 REC8O95072 547 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 TTLL1O95922 423 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 NKX2-3Q8TAU0 364 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 LPAR1Q92633 364 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 KCNB2Q92953 911 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 TTC14Q96N46 770 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
SUMO1-207ENST00000409498 E7EWF7 191 aa17.46■□□□□ 0.39
SUMO1-207ENST00000409498 SLC27A2O14975 620 aa17.46■□□□□ 0.39
SUMO1-207ENST00000409498 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.399e-8■■■□□ 15.9
SUMO1-207ENST00000409498 TREML2Q5T2D2 321 aa17.46■□□□□ 0.39
SUMO1-207ENST00000409498 CREB3L3Q68CJ9 461 aa17.46■□□□□ 0.39
SUMO1-207ENST00000409498 GADL1Q6ZQY3 521 aa17.46■□□□□ 0.39
SUMO1-207ENST00000409498 MYH4Q9Y623 1939 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 FOXN1O15353 648 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 DGKZQ13574 1117 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 CCDC178Q5BJE1 867 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
SUMO1-207ENST00000409498 STOX1Q6ZVD7 989 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 ANKS1AQ92625 1134 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 FEZ1Q99689 392 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 ZFYVE28Q9HCC9 887 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 TOMM22Q9NS69 142 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 ZSWIM5Q9P217 1185 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms