RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 NACA2Q9H009 215 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 LEMD3Q9Y2U8 911 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 POLR2MP0CAP2 368 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 NUP58Q9BVL2 599 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 FAM204AQ9H8W3 233 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 SLU7O95391 586 aaKnown RBP27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 HSPA4P34932 840 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 MXRA7P84157 204 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 ABCC4O15439 1325 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 WDR70Q9NW82 654 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 PSTPIP2Q9H939 334 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 CCDC25Q86WR0 208 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 CLSTN2Q9H4D0 955 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 FRMPD2Q68DX3 1309 aaPredicted RBP27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 SDR42E1Q8WUS8 393 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 GREM2Q9H772 168 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 E7EVH7 732 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 PRPF6O94906 941 aaKnown RBP27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 LRRC24Q50LG9 513 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 DEPTORQ8TB45 409 aa27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 EDC3Q96F86 508 aaKnown RBP27.9■■■□□ 2.06
SPIRE1-202ENST00000409402 WDR17Q8IZU2 1322 aa27.89■■■□□ 2.06
SPIRE1-202ENST00000409402 VAV2P52735 878 aa27.89■■■□□ 2.06
SPIRE1-202ENST00000409402 FAM47CQ5HY64 1035 aa27.89■■■□□ 2.06
SPIRE1-202ENST00000409402 IFT81Q8WYA0 676 aa27.89■■■□□ 2.06
SPIRE1-202ENST00000409402 HAUS7Q99871 368 aa27.89■■■□□ 2.06
SPIRE1-202ENST00000409402 SERPINB2P05120 415 aa27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 AATKQ6ZMQ8 1374 aa27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 ERCC5P28715 1186 aaPredicted RBP27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 RAD51AP2Q09MP3 1159 aa27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 CCDC26Q8TAB7 109 aa27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 FBF1Q8TES7 1133 aa27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 TM6SF1Q9BZW5 370 aa27.89■■■□□ 2.05
SPIRE1-202ENST00000409402 ZNF202O95125 648 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 TRPC6Q9Y210 931 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 GTF2F1P35269 517 aaKnown RBP eCLIP27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 MCM6Q14566 821 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 CYP26C1Q6V0L0 522 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 IWS1Q96ST2 819 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 SEMA3EO15041 775 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 SELENOSQ9BQE4 189 aa27.88■■■□□ 2.05
SPIRE1-202ENST00000409402 DYNC1I1O14576 645 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 P4HA1P13674 534 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 RASA3Q14644 834 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 NELFCDQ8IXH7 590 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 LRRC47Q8N1G4 583 aaKnown RBP27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 ANKRD35Q8N283 1001 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 MAGI2Q86UL8 1455 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 FBXO11Q86XK2 927 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 PNMA1Q8ND90 353 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 STK10O94804 968 aaKnown RBP27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 POSTNQ15063 836 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 BCRP11274 1271 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 EAF2Q96CJ1 260 aaPredicted RBP27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 METTL13Q8N6R0 699 aa27.87■■■□□ 2.05
SPIRE1-202ENST00000409402 NCAPG2Q86XI2 1143 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 PDE8BO95263 885 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 UBL4BQ8N7F7 174 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 ABCB5Q2M3G0 1257 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 BLIDQ8IZY5 108 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 ODF2LQ9ULJ1 636 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 ZBTB1Q9Y2K1 713 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 CD19P15391 556 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 GPR161Q8N6U8 529 aaKnown RBP27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 ZNF274Q96GC6 653 aaPredicted RBP27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 ZKSCAN5Q9Y2L8 839 aa27.86■■■□□ 2.05
SPIRE1-202ENST00000409402 FLOT1O75955 427 aa27.85■■■□□ 2.05
SPIRE1-202ENST00000409402 SLC9C1Q4G0N8 1177 aa27.85■■■□□ 2.05
SPIRE1-202ENST00000409402 NLRP12P59046 1061 aa27.85■■■□□ 2.05
SPIRE1-202ENST00000409402 YWHAEP62258 255 aaKnown RBP27.85■■■□□ 2.05
SPIRE1-202ENST00000409402 CEP128Q6ZU80 1094 aa27.85■■■□□ 2.05
SPIRE1-202ENST00000409402 CNGA1P29973 690 aa27.85■■■□□ 2.05
SPIRE1-202ENST00000409402 CIAO1O76071 339 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 RFX1P22670 979 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 FAM173BQ6P4H8 233 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 ZBTB8OSQ8IWT0 167 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 SLFN12Q8IYM2 578 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 BLMP54132 1417 aaPredicted RBP27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 TNKSO95271 1327 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 JAK2O60674 1132 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 PRR16Q569H4 304 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 SYT10Q6XYQ8 523 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 GIMAP7Q8NHV1 300 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 FAM102BQ5T8I3 360 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 SLFN13Q68D06 897 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 SMIM23A6NLE4 172 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 KLRF2D3W0D1 207 aa27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 PCP11498 1178 aaKnown RBP27.84■■■□□ 2.05
SPIRE1-202ENST00000409402 DDAH1O94760 285 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 ZBTB16Q05516 673 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 DCUN1D2Q6PH85 259 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 NELFBQ8WX92 580 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 BBOX1O75936 387 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 TNNI1P19237 187 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 ATP7BP35670 1465 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 FANCBQ8NB91 859 aa27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.83■■■□□ 2.05
SPIRE1-202ENST00000409402 CALCOCO1Q9P1Z2 691 aa27.83■■■□□ 2.04
SPIRE1-202ENST00000409402 HSPD1P10809 573 aaKnown RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms