RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 STX8Q9UNK0 236 aa17.93■□□□□ 0.46
AP1S3-204ENST00000409375 GREB1LQ9C091 1923 aaPredicted RBP17.93■□□□□ 0.46
AP1S3-204ENST00000409375 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
AP1S3-204ENST00000409375 CELF2O95319 508 aaKnown RBP17.92■□□□□ 0.46
AP1S3-204ENST00000409375 ITGBL1O95965 494 aaPredicted RBP17.92■□□□□ 0.46
AP1S3-204ENST00000409375 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 ICA1Q05084 483 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 FSTL1Q12841 308 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.92■□□□□ 0.46
AP1S3-204ENST00000409375 IGDCC4Q8TDY8 1250 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 AGXT2Q9BYV1 514 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 AS3MTQ9HBK9 375 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 MTMR4Q9NYA4 1195 aa17.92■□□□□ 0.46
AP1S3-204ENST00000409375 IGKV6D-41A0A0C4DH26 115 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 USP17L5A8MUK1 530 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 INPP5BP32019 993 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 AK2P54819 239 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 DLK2Q6UY11 383 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 ENAHQ8N8S7 591 aaPredicted RBP17.91■□□□□ 0.46
AP1S3-204ENST00000409375 ANKS1AQ92625 1134 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 BRF1Q92994 677 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 KAT14Q9H8E8 782 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 SYNPO2Q9UMS6 1093 aa17.91■□□□□ 0.46
AP1S3-204ENST00000409375 TOP1P11387 765 aaKnown RBP17.9■□□□□ 0.46
AP1S3-204ENST00000409375 ATP2B2Q01814 1243 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 COL9A3Q14050 684 aaPredicted RBP17.9■□□□□ 0.46
AP1S3-204ENST00000409375 BECN1Q14457 450 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 SEPT2Q15019 361 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 SEC23AQ15436 765 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 CATIPQ7Z7H3 387 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 LRRC2Q9BYS8 371 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 IL17RBQ9NRM6 502 aa17.9■□□□□ 0.46
AP1S3-204ENST00000409375 CALM1P0DP23 149 aa17.89■□□□□ 0.45
AP1S3-204ENST00000409375 CALM2P0DP24 149 aa17.89■□□□□ 0.45
AP1S3-204ENST00000409375 CALM3P0DP25 149 aa17.89■□□□□ 0.45
AP1S3-204ENST00000409375 RRP1BQ14684 758 aaKnown RBP17.89■□□□□ 0.45
AP1S3-204ENST00000409375 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
AP1S3-204ENST00000409375 SNX21Q969T3 373 aa17.89■□□□□ 0.45
AP1S3-204ENST00000409375 ZSCAN31Q96LW9 406 aaPredicted RBP17.89■□□□□ 0.45
AP1S3-204ENST00000409375 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
AP1S3-204ENST00000409375 LIMCH1Q9UPQ0 1083 aa17.89■□□□□ 0.45
AP1S3-204ENST00000409375 SLC12A7Q9Y666 1083 aa17.89■□□□□ 0.45
AP1S3-204ENST00000409375 MYH4Q9Y623 1939 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 OTOFQ9HC10 1997 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 NMT2O60551 498 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 RCAN1P53805 252 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 TOB2Q14106 344 aaPredicted RBP17.88■□□□□ 0.45
AP1S3-204ENST00000409375 VGLL4Q14135 290 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 CLIP2Q9UDT6 1046 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 NAP1L2Q9ULW6 460 aaPredicted RBP17.88■□□□□ 0.45
AP1S3-204ENST00000409375 PASKQ96RG2 1323 aa17.88■□□□□ 0.45
AP1S3-204ENST00000409375 KLF18A0A0U1RQI7 1052 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 DDAH1O94760 285 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
AP1S3-204ENST00000409375 NOVP48745 357 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 LDLRAD1Q5T700 205 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 RCSD1Q6JBY9 416 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.87■□□□□ 0.45
AP1S3-204ENST00000409375 ERO1BQ86YB8 467 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 PNMA1Q8ND90 353 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 NKX2-3Q8TAU0 364 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 MKL1Q969V6 931 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 ZNF274Q96GC6 653 aaPredicted RBP17.87■□□□□ 0.45
AP1S3-204ENST00000409375 FEZ1Q99689 392 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 TMEM47Q9BQJ4 181 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 GOPCQ9HD26 462 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 SH2B1Q9NRF2 756 aaPredicted RBP17.87■□□□□ 0.45
AP1S3-204ENST00000409375 FZD1Q9UP38 647 aa17.87■□□□□ 0.45
AP1S3-204ENST00000409375 PTPRAP18433 802 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 GUCY1A2P33402 732 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 USP14P54578 494 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 EVCP57679 992 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 PPP2R5BQ15173 497 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 APOA5Q6Q788 366 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
AP1S3-204ENST00000409375 ZNF654Q8IZM8 581 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 SLC10A4Q96EP9 437 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 WDR18Q9BV38 432 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 SNCAIPQ9Y6H5 919 aa17.86■□□□□ 0.45
AP1S3-204ENST00000409375 CCDC196A0A1B0GTZ2 297 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 GOLGA8BA8MQT2 603 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 UBE2Q2LH0YL09 131 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 ZBTB43O43298 467 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 DHX16O60231 1041 aaKnown RBP17.85■□□□□ 0.45
AP1S3-204ENST00000409375 KIF5BP33176 963 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 JAG1P78504 1218 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 PPATQ06203 517 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 FMR1Q06787 632 aaKnown RBP eCLIP17.85■□□□□ 0.45
AP1S3-204ENST00000409375 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 ZNF280CQ8ND82 737 aa17.85■□□□□ 0.45
AP1S3-204ENST00000409375 CTCFLQ8NI51 663 aaPredicted RBP17.85■□□□□ 0.45
AP1S3-204ENST00000409375 MAP3K14Q99558 947 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms