RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 UBA7P41226 1012 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 PTGDRQ13258 359 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 SNW1Q13573 536 aaKnown RBP14.29□□□□□ -0.12
ATG9A-203ENST00000409033 FAM217BQ9NTX9 383 aaPredicted RBP14.29□□□□□ -0.12
ATG9A-203ENST00000409033 CALM1P0DP23 149 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 CALM2P0DP24 149 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 CALM3P0DP25 149 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
ATG9A-203ENST00000409033 TNNI2P48788 182 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 HS1BP3Q53T59 392 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 USP40Q9NVE5 1235 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 CUTAO60888 179 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 GYS1P13807 737 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
ATG9A-203ENST00000409033 CERKQ8TCT0 537 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
ATG9A-203ENST00000409033 SCG2P13521 617 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 CACTINQ8WUQ7 758 aaKnown RBP14.28□□□□□ -0.12
ATG9A-203ENST00000409033 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 CCDC144BQ3MJ40 725 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
ATG9A-203ENST00000409033 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 RBM28Q9NW13 759 aaKnown RBP14.28□□□□□ -0.12
ATG9A-203ENST00000409033 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 SALL1Q9NSC2 1324 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 KLRF2D3W0D1 207 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 POSTNQ15063 836 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 ZYXQ15942 572 aaKnown RBP14.28□□□□□ -0.12
ATG9A-203ENST00000409033 NTRK3Q16288 839 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
ATG9A-203ENST00000409033 PARP1P09874 1014 aaKnown RBP14.27□□□□□ -0.12
ATG9A-203ENST00000409033 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.12
ATG9A-203ENST00000409033 SYMPKQ92797 1274 aaKnown RBP14.27□□□□□ -0.12
ATG9A-203ENST00000409033 BRIP1Q9BX63 1249 aa14.27□□□□□ -0.12
ATG9A-203ENST00000409033 EP400Q96L91 3159 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.13
ATG9A-203ENST00000409033 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 IDEP14735 1019 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 SLC16A2P36021 539 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 KRBA2Q6ZNG9 492 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 SLF2Q8IX21 1173 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
ATG9A-203ENST00000409033 TOGARAM1Q9Y4F4 1720 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 CCT6AP40227 531 aaKnown RBP14.27□□□□□ -0.13
ATG9A-203ENST00000409033 STAT6P42226 847 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 NLRP12P59046 1061 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 FANCCQ00597 558 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 RC3H1Q5TC82 1133 aaKnown RBP14.27□□□□□ -0.13
ATG9A-203ENST00000409033 ZNF384Q8TF68 577 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
ATG9A-203ENST00000409033 NFE2L3Q9Y4A8 694 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
ATG9A-203ENST00000409033 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 A0A1W2PQ27 194 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 A0A1W2PQ64 194 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 A0A1W2PQD8 194 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 MYL5Q02045 173 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
ATG9A-203ENST00000409033 NBPF11Q86T75 865 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
ATG9A-203ENST00000409033 VEZTQ9HBM0 779 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 SCAF8Q9UPN6 1271 aaKnown RBP14.26□□□□□ -0.13
ATG9A-203ENST00000409033 TAF1P21675 1872 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 ABCC6O95255 1503 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 CHRNA5P30532 468 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 EARS2Q5JPH6 523 aaKnown RBP14.26□□□□□ -0.13
ATG9A-203ENST00000409033 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.26□□□□□ -0.13
ATG9A-203ENST00000409033 SEMA3EO15041 775 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 CCDC178Q5BJE1 867 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 TMTC3Q6ZXV5 915 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 FNBP4Q8N3X1 1017 aaPredicted RBP14.26□□□□□ -0.13
ATG9A-203ENST00000409033 POLLQ9UGP5 575 aa14.26□□□□□ -0.13
ATG9A-203ENST00000409033 C2CD5Q86YS7 1000 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 CCDC112Q8NEF3 446 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 ITGB4P16144 1822 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 LAMB4A4D0S4 1761 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
ATG9A-203ENST00000409033 HLA-DOAP06340 250 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 TPM2P07951 284 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 KARSQ15046 597 aaKnown RBP14.25□□□□□ -0.13
ATG9A-203ENST00000409033 AXDND1Q5T1B0 1012 aaPredicted RBP14.25□□□□□ -0.13
ATG9A-203ENST00000409033 TBC1D16Q8TBP0 767 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 KCNF1Q9H3M0 494 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 PP2D1A8MPX8 630 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 CDK8P49336 464 aa14.25□□□□□ -0.13
ATG9A-203ENST00000409033 CAVIN2O95810 425 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 DDR1Q08345 913 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 ENGASEQ8NFI3 743 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 COA7Q96BR5 231 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 TXKP42681 527 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 SNAP25P60880 206 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 SF3B2Q13435 895 aaKnown RBP14.24□□□□□ -0.13
ATG9A-203ENST00000409033 ANKRD20A12PQ8NF67 263 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 RRP36Q96EU6 259 aaKnown RBP14.24□□□□□ -0.13
ATG9A-203ENST00000409033 TMEM47Q9BQJ4 181 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 SLC10A5Q5PT55 438 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
ATG9A-203ENST00000409033 BLIDQ8IZY5 108 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms