RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CABP5Q9NP86 173 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 ATP8A2Q9NTI2 1148 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 GREB1LQ9C091 1923 aaPredicted RBP18.53■□□□□ 0.56
TPM1-207ENST00000403994 GJB1P08034 283 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 VCAM1P19320 739 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 USP14P54578 494 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 SEPT2Q15019 361 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 GTF3C2Q8WUA4 911 aaPredicted RBP18.53■□□□□ 0.56
TPM1-207ENST00000403994 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 RLFQ13129 1914 aa18.53■□□□□ 0.56
TPM1-207ENST00000403994 GJA8P48165 433 aa18.52■□□□□ 0.56
TPM1-207ENST00000403994 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.56
TPM1-207ENST00000403994 POTEEQ6S8J3 1075 aa18.52■□□□□ 0.56
TPM1-207ENST00000403994 NKX2-3Q8TAU0 364 aa18.52■□□□□ 0.56
TPM1-207ENST00000403994 DYNLL2Q96FJ2 89 aa18.52■□□□□ 0.56
TPM1-207ENST00000403994 PUS7LQ9H0K6 701 aaKnown RBP18.52■□□□□ 0.56
TPM1-207ENST00000403994 SWAP70Q9UH65 585 aa18.52■□□□□ 0.56
TPM1-207ENST00000403994 CYP2D7A0A087X1C5 515 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 MPHOSPH10O00566 681 aaKnown RBP18.51■□□□□ 0.55
TPM1-207ENST00000403994 ERVK-9P63128 1117 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 ERVK-24P63145 666 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 GPRC5AQ8NFJ5 357 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 PAGR1Q9BTK6 254 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 RBPJLQ9UBG7 517 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 GJD2Q9UKL4 321 aa18.51■□□□□ 0.55
TPM1-207ENST00000403994 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 SMIM22K7EJ46 135 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 SLC34A2O95436 690 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 HMGCRP04035 888 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 TMEM179Q6ZVK1 233 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 KBTBD3Q8NAB2 608 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
TPM1-207ENST00000403994 SLC4A4Q9Y6R1 1079 aa18.5■□□□□ 0.55
TPM1-207ENST00000403994 ZNF236Q9UL36 1845 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 A0A1W2PRG0 241 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 MAPK4P31152 587 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 C12orf60Q5U649 245 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 UBE2Q1Q7Z7E8 422 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 CLEC10AQ8IUN9 316 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 AMOTL1Q8IY63 956 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 SOCS4Q8WXH5 440 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 PORCNQ9H237 461 aa18.49■□□□□ 0.55
TPM1-207ENST00000403994 RPAP3Q9H6T3 665 aaPredicted RBP18.49■□□□□ 0.55
TPM1-207ENST00000403994 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
TPM1-207ENST00000403994 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 USP17L21D6R901 530 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 CNMDO75829 334 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 AKR1B1P15121 316 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 CATSPERGQ6ZRH7 1159 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 OTUD7AQ8TE49 926 aaPredicted RBP18.48■□□□□ 0.55
TPM1-207ENST00000403994 DDRGK1Q96HY6 314 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 RABGAP1Q9Y3P9 1069 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 FRMPD3Q5JV73 1810 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 TTC41PQ6P2S7 1318 aa18.48■□□□□ 0.55
TPM1-207ENST00000403994 ALPK3Q96L96 1907 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 ROBO3Q96MS0 1386 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
TPM1-207ENST00000403994 ICA1Q05084 483 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 Q3C1V9 767 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 CTR9Q6PD62 1173 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 LBX2Q6XYB7 198 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 TRIB2Q92519 343 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 APPBP2Q92624 585 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
TPM1-207ENST00000403994 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
TPM1-207ENST00000403994 ARPP21Q9UBL0 812 aaPredicted RBP18.47■□□□□ 0.55
TPM1-207ENST00000403994 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
TPM1-207ENST00000403994 FARP2O94887 1054 aaPredicted RBP18.46■□□□□ 0.55
TPM1-207ENST00000403994 CDK8P49336 464 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 TRIM32Q13049 653 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 PI4K2BQ8TCG2 481 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 DEFB118Q96PH6 123 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
TPM1-207ENST00000403994 NUDT12Q9BQG2 462 aa18.46■□□□□ 0.55
TPM1-207ENST00000403994 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
TPM1-207ENST00000403994 RNF113AO15541 343 aaKnown RBP18.45■□□□□ 0.54
TPM1-207ENST00000403994 SGPL1O95470 568 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 MORN1Q5T089 497 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 USP6NLQ92738 828 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 TANGO6Q9C0B7 1094 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 BTBD7Q9P203 1132 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 SALL3Q9BXA9 1300 aa18.45■□□□□ 0.54
TPM1-207ENST00000403994 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 M0R2C6 588 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 ZFYP08048 801 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms