RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 PRRT2Q7Z6L0 340 aaPredicted RBP20.37■□□□□ 0.85
PTCHD3P3-201ENST00000403073 NKX2-3Q8TAU0 364 aa20.37■□□□□ 0.85
PTCHD3P3-201ENST00000403073 RNF186Q9NXI6 227 aa20.37■□□□□ 0.85
PTCHD3P3-201ENST00000403073 A0A1W2PRG0 241 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 USP17L10C9JJH3 530 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 HMGCS2P54868 508 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 BACE1P56817 501 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 GADL1Q6ZQY3 521 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 NEDD1Q8NHV4 660 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 RNF41Q9H4P4 317 aaPredicted RBP20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 KANSL2Q9H9L4 492 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 TAF6LQ9Y6J9 622 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 DOCK1Q14185 1865 aa20.36■□□□□ 0.85
PTCHD3P3-201ENST00000403073 NEDD4P46934 1319 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 IGKV6D-41A0A0C4DH26 115 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 TSPY2A6NKD2 308 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 BTBD19C9JJ37 291 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 TRPA1O75762 1119 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 EEF2P13639 858 aaKnown RBP20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 ATP2B2Q01814 1243 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 ICA1Q05084 483 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 ZYXQ15942 572 aaKnown RBP20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 GPAT2Q6NUI2 795 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 FASTKD5Q7L8L6 764 aaKnown RBP20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 BEGAINQ9BUH8 593 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 THSD7BQ9C0I4 1608 aa20.35■□□□□ 0.85
PTCHD3P3-201ENST00000403073 C19orf81C9J6K1 198 aa20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 PCP11498 1178 aaKnown RBP20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 NECTIN1Q15223 517 aa20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 SH3D19Q5HYK7 790 aa20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 OTUD7BQ6GQQ9 843 aa20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 FEZ1Q99689 392 aa20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 EMILIN3Q9NT22 766 aa20.34■□□□□ 0.85
PTCHD3P3-201ENST00000403073 NMT2O60551 498 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 HSPA1AP0DMV8 641 aaKnown RBP20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 HSPA1BP0DMV9 641 aaKnown RBP20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 TREML2Q5T2D2 321 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 USP17L2Q6R6M4 530 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 ANKRD23Q86SG2 305 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 CEP95Q96GE4 821 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 KIAA1683Q9H0B3 1180 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 IL17RBQ9NRM6 502 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 MTMR4Q9NYA4 1195 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 TMOD4Q9NZQ9 345 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 CLIP2Q9UDT6 1046 aa20.33■□□□□ 0.85
PTCHD3P3-201ENST00000403073 LAMB1P07942 1786 aa20.33■□□□□ 0.84
PTCHD3P3-201ENST00000403073 B4E1Z4 1266 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 PDHXO00330 501 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 SLC27A2O14975 620 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 CREB3L3Q68CJ9 461 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ESR2Q92731 530 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ARHGEF10LQ9HCE6 1279 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 NYAP2Q9P242 653 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TSKSQ9UJT2 592 aa20.32■□□□□ 0.84
PTCHD3P3-201ENST00000403073 E7EWF7 191 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 KDM4AO75164 1064 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TBC1D8O95759 1140 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ALDH1A1P00352 501 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 USP14P54578 494 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 STOX1Q6ZVD7 989 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 PROCA1Q8NCQ7 364 aaPredicted RBP20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 KRT23Q9C075 422 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 R3HDMLQ9H3Y0 253 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 AGTPBP1Q9UPW5 1226 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TMX2Q9Y320 296 aa20.31■□□□□ 0.84
PTCHD3P3-201ENST00000403073 FOXN1O15353 648 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 REC8O95072 547 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 KIAA1755Q5JYT7 1200 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ZKSCAN3Q9BRR0 538 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 CNNM2Q9H8M5 875 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ZSWIM5Q9P217 1185 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 PLIN4Q96Q06 1357 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ATAD5Q96QE3 1844 aa20.3■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TTLL1O95922 423 aa20.29■□□□□ 0.84
PTCHD3P3-201ENST00000403073 SH2D4AQ9H788 454 aa20.29■□□□□ 0.84
PTCHD3P3-201ENST00000403073 SAGE1Q9NXZ1 904 aa20.29■□□□□ 0.84
PTCHD3P3-201ENST00000403073 STX8Q9UNK0 236 aa20.29■□□□□ 0.84
PTCHD3P3-201ENST00000403073 PHIPQ8WWQ0 1821 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 CA12O43570 354 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 RAD21O60216 631 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 CYP2C8P10632 490 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TRDNQ13061 729 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 CRHR2Q13324 411 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TAF1CQ15572 869 aaPredicted RBP20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 CYB5R4Q7L1T6 521 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 SPICE1Q8N0Z3 855 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 MKL1Q969V6 931 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 C12orf42Q96LP6 360 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ZCCHC17Q9NP64 241 aaKnown RBP20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 TCP11L1Q9NUJ3 509 aa20.28■□□□□ 0.84
PTCHD3P3-201ENST00000403073 VCAM1P19320 739 aa20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 RNF20Q5VTR2 975 aa20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 LRRC47Q8N1G4 583 aaKnown RBP20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 NCOA7Q8NI08 942 aa20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 USP26Q9BXU7 913 aa20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.84
PTCHD3P3-201ENST00000403073 SLC45A1Q9Y2W3 748 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms