RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
VAMP1-203ENST00000400911 WDR78Q5VTH9 848 aa17.8■□□□□ 0.44
VAMP1-203ENST00000400911 MFSD14CQ5VZR4 134 aa17.8■□□□□ 0.44
VAMP1-203ENST00000400911 FEZ1Q99689 392 aa17.8■□□□□ 0.44
VAMP1-203ENST00000400911 SENP6Q9GZR1 1112 aaPredicted RBP17.8■□□□□ 0.44
VAMP1-203ENST00000400911 DOCK3Q8IZD9 2030 aa17.8■□□□□ 0.44
VAMP1-203ENST00000400911 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
VAMP1-203ENST00000400911 GLRX3O76003 335 aaKnown RBP17.79■□□□□ 0.44
VAMP1-203ENST00000400911 USP5P45974 858 aa17.79■□□□□ 0.44
VAMP1-203ENST00000400911 TATDN1Q6P1N9 297 aa17.79■□□□□ 0.44
VAMP1-203ENST00000400911 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
VAMP1-203ENST00000400911 TMEM57Q8N5G2 664 aa17.79■□□□□ 0.44
VAMP1-203ENST00000400911 SSH3Q8TE77 659 aa17.79■□□□□ 0.44
VAMP1-203ENST00000400911 C12orf42Q96LP6 360 aa17.79■□□□□ 0.44
VAMP1-203ENST00000400911 TLR7Q9NYK1 1049 aaKnown RBP17.79■□□□□ 0.44
VAMP1-203ENST00000400911 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
VAMP1-203ENST00000400911 IGSF3O75054 1194 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 PTPREP23469 700 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 CNGA1P29973 690 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 USP14P54578 494 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 ATP8B2P98198 1209 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 ACER1Q8TDN7 264 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 CCDC8Q9H0W5 538 aaPredicted RBP17.78■□□□□ 0.44
VAMP1-203ENST00000400911 SERPINB13Q9UIV8 391 aa17.78■□□□□ 0.44
VAMP1-203ENST00000400911 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
VAMP1-203ENST00000400911 ALPK3Q96L96 1907 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 SLC15A5A6NIM6 579 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 VCAM1P19320 739 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
VAMP1-203ENST00000400911 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 CERKLQ49MI3 558 aaPredicted RBP17.77■□□□□ 0.44
VAMP1-203ENST00000400911 MAGEB6Q8N7X4 407 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 KIAA1683Q9H0B3 1180 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 BTBD7Q9P203 1132 aa17.77■□□□□ 0.44
VAMP1-203ENST00000400911 DDX20Q9UHI6 824 aaKnown RBP17.77■□□□□ 0.44
VAMP1-203ENST00000400911 PLXNB2O15031 1838 aa17.77■□□□□ 0.43
VAMP1-203ENST00000400911 CYP2C19P33261 490 aa17.76■□□□□ 0.43
VAMP1-203ENST00000400911 ABCB5Q2M3G0 1257 aa17.76■□□□□ 0.43
VAMP1-203ENST00000400911 NPLOC4Q8TAT6 608 aa17.76■□□□□ 0.43
VAMP1-203ENST00000400911 EAF2Q96CJ1 260 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-203ENST00000400911 LBHD1Q9BQE6 289 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-203ENST00000400911 EHD4Q9H223 541 aa17.76■□□□□ 0.43
VAMP1-203ENST00000400911 VCANP13611 3396 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 POTEB2H3BUK9 544 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 HOXC6P09630 235 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 PLCD1P51178 756 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 GRB14Q14449 540 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 TRPV1Q8NER1 839 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 LPAR1Q92633 364 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 RPAP3Q9H6T3 665 aaPredicted RBP17.75■□□□□ 0.43
VAMP1-203ENST00000400911 ANTXR1Q9H6X2 564 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
VAMP1-203ENST00000400911 IVNS1ABPQ9Y6Y0 642 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 SIPA1L1O43166 1804 aa17.75■□□□□ 0.43
VAMP1-203ENST00000400911 EYSQ5T1H1 3165 aa17.74■□□□□ 0.43
VAMP1-203ENST00000400911 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-203ENST00000400911 SHMT1P34896 483 aa17.74■□□□□ 0.43
VAMP1-203ENST00000400911 LBX2Q6XYB7 198 aa17.74■□□□□ 0.43
VAMP1-203ENST00000400911 CERS3Q8IU89 383 aa17.74■□□□□ 0.43
VAMP1-203ENST00000400911 FAM161BQ96MY7 647 aa17.74■□□□□ 0.43
VAMP1-203ENST00000400911 CABP5Q9NP86 173 aa17.74■□□□□ 0.43
VAMP1-203ENST00000400911 ATAD5Q96QE3 1844 aa17.73■□□□□ 0.43
VAMP1-203ENST00000400911 DNM1LO00429 736 aa17.73■□□□□ 0.43
VAMP1-203ENST00000400911 MSCO60682 206 aa17.73■□□□□ 0.43
VAMP1-203ENST00000400911 GUCY1A2P33402 732 aa17.73■□□□□ 0.43
VAMP1-203ENST00000400911 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
VAMP1-203ENST00000400911 FAM109BQ6ICB4 259 aaPredicted RBP17.73■□□□□ 0.43
VAMP1-203ENST00000400911 GUCD1Q96NT3 240 aa17.73■□□□□ 0.43
VAMP1-203ENST00000400911 IGHA2P01877 340 aa17.72■□□□□ 0.43
VAMP1-203ENST00000400911 RTP1P59025 263 aa17.72■□□□□ 0.43
VAMP1-203ENST00000400911 MAP3K12Q12852 859 aa17.72■□□□□ 0.43
VAMP1-203ENST00000400911 GJC2Q5T442 439 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-203ENST00000400911 DPP9Q86TI2 863 aa17.72■□□□□ 0.43
VAMP1-203ENST00000400911 PRKAG2Q9UGJ0 569 aa17.72■□□□□ 0.43
VAMP1-203ENST00000400911 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
VAMP1-203ENST00000400911 SEPT2Q15019 361 aa17.71■□□□□ 0.43
VAMP1-203ENST00000400911 ANO1Q5XXA6 986 aa17.71■□□□□ 0.43
VAMP1-203ENST00000400911 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
VAMP1-203ENST00000400911 COL25A1Q9BXS0 654 aaPredicted RBP17.71■□□□□ 0.43
VAMP1-203ENST00000400911 MOV10L1Q9BXT6 1211 aaKnown RBP17.71■□□□□ 0.43
VAMP1-203ENST00000400911 HOXC10Q9NYD6 342 aa17.71■□□□□ 0.43
VAMP1-203ENST00000400911 ATP11BQ9Y2G3 1177 aa17.71■□□□□ 0.43
VAMP1-203ENST00000400911 A0A1W2PRG0 241 aa17.7■□□□□ 0.42
VAMP1-203ENST00000400911 CYBAP13498 195 aa17.7■□□□□ 0.42
VAMP1-203ENST00000400911 ADORA2AP29274 412 aa17.7■□□□□ 0.42
VAMP1-203ENST00000400911 EVX2Q03828 476 aa17.7■□□□□ 0.42
VAMP1-203ENST00000400911 GABPAQ06546 454 aa17.7■□□□□ 0.42
VAMP1-203ENST00000400911 COG2Q14746 738 aa17.7■□□□□ 0.42
VAMP1-203ENST00000400911 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
VAMP1-203ENST00000400911 MPHOSPH10O00566 681 aaKnown RBP17.69■□□□□ 0.42
VAMP1-203ENST00000400911 STRNO43815 780 aa17.69■□□□□ 0.42
VAMP1-203ENST00000400911 COBLO75128 1261 aa17.69■□□□□ 0.42
VAMP1-203ENST00000400911 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
VAMP1-203ENST00000400911 OLFML2BQ68BL8 750 aa17.69■□□□□ 0.42
VAMP1-203ENST00000400911 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
VAMP1-203ENST00000400911 ARRDC4Q8NCT1 418 aa17.69■□□□□ 0.42
VAMP1-203ENST00000400911 SPATC1LQ9H0A9 340 aa17.69■□□□□ 0.42
VAMP1-203ENST00000400911 MAGEB6P1A0A0J9YX57 407 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms