RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 PRDM15P57071 1507 aaPredicted RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 TLDC2A0PJX2 215 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 MTX1Q13505 466 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 ZNF354CQ86Y25 554 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 C17orf53Q8N3J3 647 aaPredicted RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 ZBED4O75132 1171 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CFBP00751 764 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 BIN2Q9UBW5 565 aaPredicted RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CCDC25Q86WR0 208 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 ANKS4BQ8N8V4 417 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 PUS3Q9BZE2 481 aaKnown RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 XPO4Q9C0E2 1151 aaKnown RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 PREX2Q70Z35 1606 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 ATP2B4P23634 1241 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 STRN3Q13033 797 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 ZMYM1Q5SVZ6 1142 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 C8orf74Q6P047 294 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CMTR1Q8N1G2 835 aaKnown RBP17.05■□□□□ 0.32
ABCC1-201ENST00000399408 CMA1P23946 247 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 NR1I2O75469 434 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 PKP1Q13835 747 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 FBF1Q8TES7 1133 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 TLR7Q9NYK1 1049 aaKnown RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 PABPN1LA6NDY0 278 aaKnown RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 STX10O60499 249 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 TBC1D7Q9P0N9 293 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 SMIM23A6NLE4 172 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 MAGEA1P43355 309 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 PHKA1P46020 1223 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 FAM76AQ8TAV0 307 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 CARD6Q9BX69 1037 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 DDX39AO00148 427 aaKnown RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 DDAH1O94760 285 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 TERF1P54274 439 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 CPXCR1Q8N123 301 aa17.04■□□□□ 0.32
ABCC1-201ENST00000399408 CDK12Q9NYV4 1490 aaPredicted RBP17.04■□□□□ 0.32
ABCC1-201ENST00000399408 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 SIK1P57059 783 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
ABCC1-201ENST00000399408 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 IQCDQ96DY2 449 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.03■□□□□ 0.32
ABCC1-201ENST00000399408 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
ABCC1-201ENST00000399408 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 EBAG9O00559 213 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 EXOC3O60645 756 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 ADORA1P30542 326 aa17.03■□□□□ 0.32
ABCC1-201ENST00000399408 SCG2P13521 617 aa17.02■□□□□ 0.32
ABCC1-201ENST00000399408 UBLCP1Q8WVY7 318 aaPredicted RBP17.02■□□□□ 0.32
ABCC1-201ENST00000399408 U2AF2P26368 475 aaKnown RBP eCLIP17.02■□□□□ 0.323e-8■■■□□ 16.2
ABCC1-201ENST00000399408 DNAJC21Q5F1R6 531 aaKnown RBP17.02■□□□□ 0.32
ABCC1-201ENST00000399408 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
ABCC1-201ENST00000399408 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
ABCC1-201ENST00000399408 ZEB2O60315 1214 aa17.02■□□□□ 0.32
ABCC1-201ENST00000399408 PCP11498 1178 aaKnown RBP17.02■□□□□ 0.32
ABCC1-201ENST00000399408 SCRN1Q12765 414 aa17.02■□□□□ 0.32
ABCC1-201ENST00000399408 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.32
ABCC1-201ENST00000399408 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.31
ABCC1-201ENST00000399408 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.31
ABCC1-201ENST00000399408 LIN9Q5TKA1 542 aa17.02■□□□□ 0.31
ABCC1-201ENST00000399408 CCDC51Q96ER9 411 aa17.02■□□□□ 0.31
ABCC1-201ENST00000399408 CSRNP2Q9H175 543 aa17.02■□□□□ 0.31
ABCC1-201ENST00000399408 MRPL44Q9H9J2 332 aaKnown RBP17.02■□□□□ 0.31
ABCC1-201ENST00000399408 GCNT3O95395 438 aa17.02■□□□□ 0.31
ABCC1-201ENST00000399408 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.31
ABCC1-201ENST00000399408 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 GRM1Q13255 1194 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 MAEAQ7L5Y9 396 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 PPIP5K2O43314 1243 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 KLHL30Q0D2K2 578 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 CCDC121Q6ZUS5 278 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
ABCC1-201ENST00000399408 SLF1Q9BQI6 1058 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 SSX2IPQ9Y2D8 614 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 BTBD18B2RXH4 712 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 APBA3O96018 575 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 TRPC3Q13507 836 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 USPL1Q5W0Q7 1092 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 CPLX4Q7Z7G2 160 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 UBL4BQ8N7F7 174 aa17.01■□□□□ 0.31
ABCC1-201ENST00000399408 ERBB3P21860 1342 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms