RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CDC37L1Q7L3B6 337 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 CCDC155Q8N6L0 562 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 ZBTB1Q9Y2K1 713 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 E7EWF7 191 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 BMS1Q14692 1282 aaKnown RBP12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 PLCD1P51178 756 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 PTH1RQ03431 593 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
PCDHGA8-201ENST00000398604 PABPN1LA6NDY0 278 aaKnown RBP12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 HSF2BPO75031 334 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 CTSWP56202 376 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 IGSF22Q8N9C0 903 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 BLZF1Q9H2G9 400 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 MYO5BQ9ULV0 1848 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 ELP1O95163 1332 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 GREM2Q9H772 168 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 SHPRHQ149N8 1683 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 H7C1D1 291 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 ZNF202O95125 648 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 FLAD1Q8NFF5 587 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 MRRFQ96E11 262 aaKnown RBP12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 TSNARE1Q96NA8 513 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 PALD1Q9ULE6 856 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 SSX2IPQ9Y2D8 614 aa12.91□□□□□ -0.34
PCDHGA8-201ENST00000398604 IRX3P78415 501 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 PHKA1P46020 1223 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 FAM196AQ6ZSG2 479 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 C17orf53Q8N3J3 647 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 NFE2L3Q9Y4A8 694 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 CETN3O15182 167 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 STAMBPO95630 424 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 PDE6AP16499 860 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 ATP5JP18859 108 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 SMTNP53814 917 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 FBF1Q8TES7 1133 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 CD19P15391 556 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 ADCY7P51828 1080 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 TPH2Q8IWU9 490 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 GLG1Q92896 1179 aa12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
PCDHGA8-201ENST00000398604 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZEB2O60315 1214 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ALAS1P13196 640 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZNF654Q8IZM8 581 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 MYCT1Q8N699 235 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 PRIMPOLQ96LW4 560 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 MROH5Q6ZUA9 1318 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 SPOPO43791 374 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ME3Q16798 604 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 REXO1Q8N1G1 1221 aaKnown RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 SLU7O95391 586 aaKnown RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 RXRBP28702 533 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 WDR44Q5JSH3 913 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 CCDC114Q96M63 670 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 STX10O60499 249 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 EXOC3O60645 756 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 ADORA1P30542 326 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 PPARAQ07869 468 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 IFT74Q96LB3 600 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 TRIM31Q9BZY9 425 aa12.89□□□□□ -0.35
PCDHGA8-201ENST00000398604 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 AKR1B15C9JRZ8 316 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 FGAP02671 866 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 TICAM2Q86XR7 235 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 NLRC4Q9NPP4 1024 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 ZBED4O75132 1171 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 KRT19P08727 400 aa12.88□□□□□ -0.35
PCDHGA8-201ENST00000398604 TRPC3Q13507 836 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms