RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 CCDC121Q6ZUS5 278 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 RSRC1Q96IZ7 334 aaKnown RBP16.9■□□□□ 0.3
CYLD-202ENST00000398568 MMS19Q96T76 1030 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 HPSEQ9Y251 543 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 A0A1B0GTH6 734 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 TEX33O43247 280 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 CASP14P31944 242 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 SKOR1P84550 965 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 FMR1Q06787 632 aaKnown RBP eCLIP16.9■□□□□ 0.3
CYLD-202ENST00000398568 LONRF3Q496Y0 759 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 FAM43BQ6ZT52 329 aaPredicted RBP16.9■□□□□ 0.3
CYLD-202ENST00000398568 STOX1Q6ZVD7 989 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 PARP9Q8IXQ6 854 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 CCDC13Q8IYE1 715 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 KCNH3Q9ULD8 1083 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
CYLD-202ENST00000398568 SLC8A1P32418 973 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 TMED8Q6PL24 325 aaPredicted RBP16.89■□□□□ 0.29
CYLD-202ENST00000398568 SH3GL3Q99963 347 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 DDX20Q9UHI6 824 aaKnown RBP16.89■□□□□ 0.29
CYLD-202ENST00000398568 MAN1B1Q9UKM7 699 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 ENC1O14682 589 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 RXRBP28702 533 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 ATP1A2P50993 1020 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 IFT88Q13099 833 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 E2F5Q15329 346 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 ZNF772Q68DY9 489 aaPredicted RBP16.89■□□□□ 0.29
CYLD-202ENST00000398568 SHC4Q6S5L8 630 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 CHST3Q7LGC8 479 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 TRAPPC11Q7Z392 1133 aa16.89■□□□□ 0.29
CYLD-202ENST00000398568 GNAT3A8MTJ3 354 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 IL2RBP14784 551 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 NAP1L1P55209 391 aaKnown RBP16.88■□□□□ 0.29
CYLD-202ENST00000398568 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 ACSBG1Q96GR2 724 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 ABCA3Q99758 1704 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 PPP6R2O75170 966 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 RASSF9O75901 435 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 SASH1O94885 1247 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 CYP26C1Q6V0L0 522 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 KIAA1328Q86T90 577 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 FOXP4Q8IVH2 680 aaPredicted RBP16.88■□□□□ 0.29
CYLD-202ENST00000398568 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 CCNHP51946 323 aaPredicted RBP16.88■□□□□ 0.29
CYLD-202ENST00000398568 VPS72Q15906 364 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 MPRIPQ6WCQ1 1025 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.88■□□□□ 0.29
CYLD-202ENST00000398568 CTAGE1Q96RT6 745 aa16.88■□□□□ 0.29
CYLD-202ENST00000398568 ACTR5Q9H9F9 607 aaPredicted RBP16.88■□□□□ 0.29
CYLD-202ENST00000398568 RPSAP08865 295 aaKnown RBP16.87■□□□□ 0.29
CYLD-202ENST00000398568 DRP2Q13474 957 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 NBPF3Q9H094 633 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
CYLD-202ENST00000398568 ABL1P00519 1130 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
CYLD-202ENST00000398568 TBC1D8BQ0IIM8 1120 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 NAA35Q5VZE5 725 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
CYLD-202ENST00000398568 HDAC6Q9UBN7 1215 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
CYLD-202ENST00000398568 DDB1Q16531 1140 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 EPN3Q9H201 632 aa16.87■□□□□ 0.29
CYLD-202ENST00000398568 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 MYBL2P10244 700 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 BMP6P22004 513 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 POSTNQ15063 836 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 ZNF827Q17R98 1081 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 RESP18Q5W5W9 173 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 ZNF473Q8WTR7 871 aaKnown RBP16.86■□□□□ 0.29
CYLD-202ENST00000398568 NUP88Q99567 741 aaPredicted RBP16.86■□□□□ 0.29
CYLD-202ENST00000398568 ATP6V0A4Q9HBG4 840 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 SLIT2O94813 1529 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 COL22A1Q8NFW1 1626 aaPredicted RBP16.86■□□□□ 0.29
CYLD-202ENST00000398568 RGPD2P0DJD1 1756 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 PDHBP11177 359 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 ALS2CLQ60I27 953 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 KIF28PB7ZC32 967 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 SRGAP2O75044 1071 aa16.86■□□□□ 0.29
CYLD-202ENST00000398568 CPSF2Q9P2I0 782 aaKnown RBP16.86■□□□□ 0.29
CYLD-202ENST00000398568 RTN2O75298 545 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 GRIK3Q13003 919 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 CYB5D1Q6P9G0 228 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 KIRREL3Q8IZU9 778 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 AGXT2Q9BYV1 514 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 FOXN1O15353 648 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 LSP1P33241 339 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 GJB4Q9NTQ9 266 aa16.85■□□□□ 0.29
CYLD-202ENST00000398568 SLC8A3P57103 927 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 TTC39AQ5SRH9 613 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 HAUS4Q9H6D7 363 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 E7EWF7 191 aa16.84■□□□□ 0.29
CYLD-202ENST00000398568 EPB41P11171 864 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms