RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 USP17L19D6RCP7 530 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 USP17L20D6RJB6 530 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 SYN1P17600 705 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 SHMT1P34896 483 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 USP5P45974 858 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 PLCD1P51178 756 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 USP17L24Q0WX57 530 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 TRMT44Q8IYL2 757 aaKnown RBP14.68□□□□□ -0.06
TFF3-202ENST00000398431 RIOK1Q9BRS2 568 aaKnown RBP14.68□□□□□ -0.06
TFF3-202ENST00000398431 FLRT1Q9NZU1 646 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 SERPINB13Q9UIV8 391 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
TFF3-202ENST00000398431 ZKSCAN1P17029 563 aaPredicted RBP14.67□□□□□ -0.06
TFF3-202ENST00000398431 RGS2P41220 211 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 EVX2Q03828 476 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 ZYXQ15942 572 aaKnown RBP14.67□□□□□ -0.06
TFF3-202ENST00000398431 CERKLQ49MI3 558 aaPredicted RBP14.67□□□□□ -0.06
TFF3-202ENST00000398431 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 ITPRIPQ8IWB1 547 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 GTF3C2Q8WUA4 911 aaPredicted RBP14.67□□□□□ -0.06
TFF3-202ENST00000398431 EDC3Q96F86 508 aaKnown RBP14.67□□□□□ -0.06
TFF3-202ENST00000398431 KIAA1683Q9H0B3 1180 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 BTBD7Q9P203 1132 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 EXOC6BQ9Y2D4 811 aa14.67□□□□□ -0.06
TFF3-202ENST00000398431 IGHA2P01877 340 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 MAGEA10P43363 369 aaPredicted RBP14.66□□□□□ -0.06
TFF3-202ENST00000398431 GABPAQ06546 454 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 MAP3K12Q12852 859 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 PDE3AQ14432 1141 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 ABCB5Q2M3G0 1257 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 LBX2Q6XYB7 198 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 CERS3Q8IU89 383 aa14.66□□□□□ -0.06
TFF3-202ENST00000398431 VCAM1P19320 739 aa14.65□□□□□ -0.06
TFF3-202ENST00000398431 PTPREP23469 700 aa14.65□□□□□ -0.06
TFF3-202ENST00000398431 RAB3GAP1Q15042 981 aa14.65□□□□□ -0.06
TFF3-202ENST00000398431 LRRC26Q2I0M4 334 aa14.65□□□□□ -0.06
TFF3-202ENST00000398431 TMED8Q6PL24 325 aaPredicted RBP14.65□□□□□ -0.06
TFF3-202ENST00000398431 AACSQ86V21 672 aa14.65□□□□□ -0.06
TFF3-202ENST00000398431 CCAR1Q8IX12 1150 aaKnown RBP14.65□□□□□ -0.06
TFF3-202ENST00000398431 FTSJ3Q8IY81 847 aaKnown RBP14.65□□□□□ -0.06
TFF3-202ENST00000398431 APBA2Q99767 749 aa14.65□□□□□ -0.06
TFF3-202ENST00000398431 A0A1W2PRG0 241 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 SLC15A5A6NIM6 579 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 HOXC6P09630 235 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 USP14P54578 494 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 SEPT2Q15019 361 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 LRIT3Q3SXY7 679 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 NPLOC4Q8TAT6 608 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 RHPN1Q8TCX5 695 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 PANK1Q8TE04 598 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 FEZ1Q99689 392 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 IL1RAPL2Q9NP60 686 aa14.64□□□□□ -0.07
TFF3-202ENST00000398431 MAGEB6P1A0A0J9YX57 407 aa14.63□□□□□ -0.07
TFF3-202ENST00000398431 SPDYE16A6NNV3 312 aaPredicted RBP14.63□□□□□ -0.07
TFF3-202ENST00000398431 CCNA1P78396 465 aa14.63□□□□□ -0.07
TFF3-202ENST00000398431 KIAA1755Q5JYT7 1200 aa14.63□□□□□ -0.07
TFF3-202ENST00000398431 GPR153Q6NV75 609 aa14.63□□□□□ -0.07
TFF3-202ENST00000398431 RPAP3Q9H6T3 665 aaPredicted RBP14.63□□□□□ -0.07
TFF3-202ENST00000398431 CABP5Q9NP86 173 aa14.63□□□□□ -0.07
TFF3-202ENST00000398431 LAMA3Q16787 3333 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 TCRBV5S4A2TA0A5A2 114 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
TFF3-202ENST00000398431 PDE6AP16499 860 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 HNRNPUQ00839 825 aaKnown RBP eCLIP14.62□□□□□ -0.07
TFF3-202ENST00000398431 GRB14Q14449 540 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 SLC9C2Q5TAH2 1124 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 ERC1Q8IUD2 1116 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 TDHQ8IZJ6 230 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 SLC17A8Q8NDX2 589 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 TRPV1Q8NER1 839 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 RLFQ13129 1914 aa14.62□□□□□ -0.07
TFF3-202ENST00000398431 GLRX3O76003 335 aaKnown RBP14.61□□□□□ -0.07
TFF3-202ENST00000398431 CYP2D6P10635 497 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 WDR78Q5VTH9 848 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 MFSD14CQ5VZR4 134 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 Q7L0L9 218 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 SIRT2Q8IXJ6 389 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 UBE2OQ9C0C9 1292 aaKnown RBP14.61□□□□□ -0.07
TFF3-202ENST00000398431 DCP1AQ9NPI6 582 aaPredicted RBP14.61□□□□□ -0.07
TFF3-202ENST00000398431 MCM9Q9NXL9 1143 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 ZNF532Q9HCE3 1301 aa14.61□□□□□ -0.07
TFF3-202ENST00000398431 FRMPD3Q5JV73 1810 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 SMIM22K7EJ46 135 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 CYP2C19P33261 490 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 ATP2B2Q01814 1243 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 COG2Q14746 738 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 TTF1Q15361 905 aaPredicted RBP14.6□□□□□ -0.07
TFF3-202ENST00000398431 LCORLQ8N3X6 602 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.6□□□□□ -0.07
TFF3-202ENST00000398431 SDR42E1Q8WUS8 393 aa14.6□□□□□ -0.07
TFF3-202ENST00000398431 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
TFF3-202ENST00000398431 CWC22Q9HCG8 908 aaKnown RBP14.6□□□□□ -0.07
TFF3-202ENST00000398431 DDX20Q9UHI6 824 aaKnown RBP14.6□□□□□ -0.07
TFF3-202ENST00000398431 PRKAB2O43741 272 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
TFF3-202ENST00000398431 HSP90AB4PQ58FF6 505 aa14.59□□□□□ -0.07
TFF3-202ENST00000398431 DEFB123Q8N688 67 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms