RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 DCP1AQ9NPI6 582 aaPredicted RBP21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SRPRBQ9Y5M8 271 aaKnown RBP21.01■□□□□ 0.95
CHRFAM7A-202ENST00000397827 MYH13Q9UKX3 1938 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SFPQP23246 707 aaKnown RBP eCLIP21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NYAP1Q6ZVC0 841 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NGLY1Q96IV0 654 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 ZPR1O75312 459 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 PPP2R5BQ15173 497 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NOM1Q5C9Z4 860 aaKnown RBP21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NYXQ9GZU5 481 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 MAN1B1Q9UKM7 699 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 PAXBP1Q9Y5B6 917 aa21■□□□□ 0.95
CHRFAM7A-202ENST00000397827 WNT7AO00755 349 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 FGRP09769 529 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 XBP1P17861 261 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CFAP100Q494V2 611 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CCDC112Q8NEF3 446 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 PHF20Q9BVI0 1012 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CCDC150Q8NCX0 1101 aa20.99■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SEMA3EO15041 775 aa20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 PRPF3O43395 683 aaKnown RBP20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 KRT2P35908 639 aa20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 E4F1Q66K89 784 aaPredicted RBP20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CEP131Q9UPN4 1083 aa20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 LTBP4Q8N2S1 1624 aa20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NAA30Q147X3 362 aaPredicted RBP20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 HOOK1Q9UJC3 728 aaKnown RBP20.98■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TRIM75PA6NK02 468 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TMEM232C9JQI7 657 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TPTE2Q6XPS3 522 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NPHP1O15259 732 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 ZNF579Q8NAF0 562 aaKnown RBP20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 EPSTI1Q96J88 318 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 RBM28Q9NW13 759 aaKnown RBP20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 FMR1Q06787 632 aaKnown RBP eCLIP20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TMTC3Q6ZXV5 915 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SRBD1Q8N5C6 995 aaKnown RBP20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 ANKRD2Q9GZV1 360 aa20.97■□□□□ 0.95
CHRFAM7A-202ENST00000397827 ACTN4O43707 911 aaKnown RBP20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 GOLGA8FQ08AF8 430 aa20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 GOLGA8DPQ0D2H9 430 aa20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TRMT44Q8IYL2 757 aaKnown RBP20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 SMARCE1Q969G3 411 aa20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 A0A087X0B3 334 aa20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 VEGFAP15692 232 aaPredicted RBP20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 TM4SF1P30408 202 aa20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 ARHGEF1Q92888 912 aaKnown RBP20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 DHX58Q96C10 678 aa20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 CCNL1Q9UK58 526 aaPredicted RBP20.96■□□□□ 0.95
CHRFAM7A-202ENST00000397827 NCBP1Q09161 790 aaKnown RBP20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ZNF174Q15697 407 aa20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ELOA2Q8IYF1 753 aaPredicted RBP20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CALM1P0DP23 149 aa20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CALM2P0DP24 149 aa20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CALM3P0DP25 149 aa20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 PCP11498 1178 aaKnown RBP20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 SARSP49591 514 aaKnown RBP20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 NPY5RQ15761 445 aa20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 RTCBQ9Y3I0 505 aaKnown RBP20.95■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CNTNAP5Q8WYK1 1306 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 DDAH1O94760 285 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 USP17L8P0C7I0 530 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 RC3H1Q5TC82 1133 aaKnown RBP20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CTCFLQ8NI51 663 aaPredicted RBP20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ANKRD7Q92527 254 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 MCM9Q9NXL9 1143 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 TSPY2A6NKD2 308 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CBFA2T2O43439 604 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ORC4O43929 436 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 CASP1P29466 404 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 VPS72Q15906 364 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 NT5DC1Q5TFE4 455 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 DZIP1Q86YF9 867 aaKnown RBP20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 PPP1R13BQ96KQ4 1090 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ATP8A2Q9NTI2 1148 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 INTS13Q9NVM9 706 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 NFE2L3Q9Y4A8 694 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ZNF831Q5JPB2 1677 aa20.94■□□□□ 0.94
CHRFAM7A-202ENST00000397827 AFMP43652 599 aa20.93■□□□□ 0.94
CHRFAM7A-202ENST00000397827 MORC3Q14149 939 aa20.93■□□□□ 0.94
CHRFAM7A-202ENST00000397827 KCND1Q9NSA2 647 aa20.93■□□□□ 0.94
CHRFAM7A-202ENST00000397827 VSTM4Q8IW00 320 aa20.93■□□□□ 0.94
CHRFAM7A-202ENST00000397827 SYMPKQ92797 1274 aaKnown RBP20.93■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ADAMTS3O15072 1205 aa20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 MED15Q96RN5 788 aa20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ANKIB1Q9P2G1 1089 aa20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 ARPP21Q9UBL0 812 aaPredicted RBP20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 TOP1P11387 765 aaKnown RBP20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 TNFRSF25Q93038 417 aa20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 BRMS1Q9HCU9 246 aa20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 PDS5AQ29RF7 1337 aaKnown RBP20.92■□□□□ 0.94
CHRFAM7A-202ENST00000397827 MLKLQ8NB16 471 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 RGL2O15211 777 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 RCSD1Q6JBY9 416 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 GPR101Q96P66 508 aaPredicted RBP20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 FEZ1Q99689 392 aa20.91■□□□□ 0.94
CHRFAM7A-202ENST00000397827 VWA3AA6NCI4 1184 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms