RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 VGLL2Q8N8G2 317 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 TACO1Q9BSH4 297 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 FAM217BQ9NTX9 383 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 VPS54Q9P1Q0 977 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 IMPACTQ9P2X3 320 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 DNAI1Q9UI46 699 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 KCNH3Q9ULD8 1083 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 NIP7Q9Y221 180 aaKnown RBP eCLIP5.7□□□□□ -1.5
SSR1-202ENST00000397511 TJP1Q07157 1748 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 YEATS4O95619 227 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 CMA1P23946 247 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 EIF5P55010 431 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 NLRP12P59046 1061 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 MAP2K1Q02750 393 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 NKX1-1Q15270 411 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 TTF1Q15361 905 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 PUM3Q15397 648 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 SLC51AQ86UW1 340 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 LPIN2Q92539 896 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.7□□□□□ -1.5
SSR1-202ENST00000397511 CARD6Q9BX69 1037 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 FUT8Q9BYC5 575 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 A0A1W2PQ27 194 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 A0A1W2PQ64 194 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 A0A1W2PQD8 194 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 TCRBV5S4A2TA0A5A2 114 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 CCDC189A1A4V9 331 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 ERICH2A1L162 156 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 GSG1L2A8MUP6 293 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 NMT2O60551 498 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 BMP6P22004 513 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 CYP7A1P22680 504 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 CDC25AP30304 524 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 DYNLL1P63167 89 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 WTAPQ15007 396 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 NTRK3Q16288 839 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 GIMAP7Q8NHV1 300 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 FAM212AQ96EL1 285 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 EEF2KMTQ96G04 330 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 ZSWIM4Q9H7M6 989 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 CPDO75976 1380 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 GLI3P10071 1580 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 H3BQF6 201 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 KIF3CO14782 793 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 KCNQ2O43526 872 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 CDKL5O76039 1030 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 SLC5A1P13866 664 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 TOB1P50616 345 aaPredicted RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 PTPAQ15257 358 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 EARS2Q5JPH6 523 aaKnown RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 AKNAD1Q5T1N1 836 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 FAM182BQ5T319 152 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 FOXR1Q6PIV2 292 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 OLFM4Q6UX06 510 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 CHRDL2Q6WN34 429 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.69□□□□□ -1.5
SSR1-202ENST00000397511 DHX58Q96C10 678 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 EPSTI1Q96J88 318 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 UBAC1Q9BSL1 405 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 DESI2Q9BSY9 194 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 OSBPL5Q9H0X9 879 aaPredicted RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 HSD3B7Q9H2F3 369 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 ERLIN2O94905 339 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 CHRNDQ07001 517 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 BRD3Q15059 726 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 UBE3CQ15386 1083 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 SAFBQ15424 915 aaKnown RBP eCLIP5.69□□□□□ -1.5
SSR1-202ENST00000397511 RTN1Q16799 776 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 LONRF2Q1L5Z9 754 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 FAM47AQ5JRC9 791 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 ATL3Q6DD88 541 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 NOSTRINQ8IVI9 506 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 TRIM22Q8IYM9 498 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 RNF217Q8TC41 542 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 MAP3K14Q99558 947 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 SAMSN1Q9NSI8 373 aaKnown RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 MAPK8IP1Q9UQF2 711 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 ABCC6O95255 1503 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 CCDC151A5D8V7 595 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 WNT7AO00755 349 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 PPFIA4O75335 1185 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 KLRK1P26718 216 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 IGHMBP2P38935 993 aaKnown RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 CRKLP46109 303 aaKnown RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 MYL5Q02045 173 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 FMR1Q06787 632 aaKnown RBP eCLIP5.69□□□□□ -1.5
SSR1-202ENST00000397511 TRIM28Q13263 835 aaKnown RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 HSP90B2PQ58FF3 399 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 C3orf67Q6ZVT6 689 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 HDXQ7Z353 690 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 RABGGTAQ92696 567 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 TEX13AQ9BXU3 409 aaPredicted RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 IRX2Q9BZI1 471 aaPredicted RBP5.69□□□□□ -1.5
SSR1-202ENST00000397511 TFCP2L1Q9NZI6 479 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 NFE2L3Q9Y4A8 694 aa5.69□□□□□ -1.5
SSR1-202ENST00000397511 V9GY48 417 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms