RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-208ENST00000397204 PPP4CP60510 307 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 MMRN1Q13201 1228 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 TEX11Q8IYF3 940 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 PAWRQ96IZ0 340 aaKnown RBP10.77□□□□□ -0.69
CAPN3-208ENST00000397204 NOL10Q9BSC4 688 aaKnown RBP10.77□□□□□ -0.69
CAPN3-208ENST00000397204 ASCC2Q9H1I8 757 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-208ENST00000397204 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 GINM1Q9NU53 330 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 RPTORQ8N122 1335 aa10.77□□□□□ -0.69
CAPN3-208ENST00000397204 HMGCRP04035 888 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 ASNSP08243 561 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 HOXA7P31268 230 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-208ENST00000397204 HMGCS2P54868 508 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 BACE1P56817 501 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 TYW1BQ6NUM6 668 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 METTL16Q86W50 562 aaKnown RBP10.76□□□□□ -0.69
CAPN3-208ENST00000397204 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.76□□□□□ -0.69
CAPN3-208ENST00000397204 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-208ENST00000397204 GPR108Q9NPR9 543 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-208ENST00000397204 MORF4L1Q9UBU8 362 aa10.76□□□□□ -0.69
CAPN3-208ENST00000397204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-208ENST00000397204 COL2A1P02458 1487 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-208ENST00000397204 FAM196BA6NMK8 535 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 C19orf81C9J6K1 198 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 PTPREP23469 700 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 BMP8BP34820 402 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 RRP1BQ14684 758 aaKnown RBP10.75□□□□□ -0.69
CAPN3-208ENST00000397204 PI16Q6UXB8 463 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 SH3RF3Q8TEJ3 882 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-208ENST00000397204 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 TMOD4Q9NZQ9 345 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 STAP2Q9UGK3 403 aa10.75□□□□□ -0.69
CAPN3-208ENST00000397204 MYH2Q9UKX2 1941 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 XRCC5P13010 732 aaKnown RBP10.74□□□□□ -0.69
CAPN3-208ENST00000397204 MCAMP43121 646 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 IRX3P78415 501 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-208ENST00000397204 CCDC158Q5M9N0 1113 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 NAA16Q6N069 864 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-208ENST00000397204 ATF7IPQ6VMQ6 1270 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
CAPN3-208ENST00000397204 GPRC5AQ8NFJ5 357 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 ZNF512BQ96KM6 892 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-208ENST00000397204 P2RX7Q99572 595 aaKnown RBP10.74□□□□□ -0.69
CAPN3-208ENST00000397204 GDF15Q99988 308 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 OGDHLQ9ULD0 1010 aa10.74□□□□□ -0.69
CAPN3-208ENST00000397204 PNMA6EA0A0J9YXQ4 647 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 NBR1Q14596 966 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 EPAS1Q99814 870 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 NUDT12Q9BQG2 462 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 AATFQ9NY61 560 aaKnown RBP eCLIP10.73□□□□□ -0.69
CAPN3-208ENST00000397204 MYH13Q9UKX3 1938 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 DOCK3Q8IZD9 2030 aa10.73□□□□□ -0.69
CAPN3-208ENST00000397204 GRXCR2A6NFK2 248 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 TRIM27P14373 513 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 MAPK4P31152 587 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 HERVK_113P62684 666 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 MTMR2Q13614 643 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 TTC39AQ5SRH9 613 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 MAP3K21Q5TCX8 1036 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 CCAR1Q8IX12 1150 aaKnown RBP10.72□□□□□ -0.69
CAPN3-208ENST00000397204 CRACR2BQ8N4Y2 399 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-208ENST00000397204 SLC17A8Q8NDX2 589 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 DIS3LQ8TF46 1054 aaKnown RBP10.72□□□□□ -0.69
CAPN3-208ENST00000397204 GTF3C2Q8WUA4 911 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-208ENST00000397204 TGFBRAP1Q8WUH2 860 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 SOCS4Q8WXH5 440 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 TRIM34Q9BYJ4 488 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 RBPJLQ9UBG7 517 aa10.72□□□□□ -0.69
CAPN3-208ENST00000397204 SOX1O00570 391 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-208ENST00000397204 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-208ENST00000397204 CYP2B6P20813 491 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 JAG1P78504 1218 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 ATP8B2P98198 1209 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 TRIM32Q13049 653 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 PDE3AQ14432 1141 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 TNNI3KQ59H18 835 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 CERS3Q8IU89 383 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 MAPKAPK5Q8IW41 473 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 SSH3Q8TE77 659 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 TRIB2Q92519 343 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 USP6NLQ92738 828 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 FRAT1Q92837 279 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-208ENST00000397204 C11orf49Q9H6J7 331 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 PALD1Q9ULE6 856 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 FPGT-TNNI3KV9GXZ4 949 aa10.71□□□□□ -0.69
CAPN3-208ENST00000397204 MGAMO43451 1857 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 DNAH12Q6ZR08 3092 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 FLT1P17948 1338 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 CCER2I3L3R5 266 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 ERVK-24P63145 666 aa10.7□□□□□ -0.7
CAPN3-208ENST00000397204 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-208ENST00000397204 Q3C1V9 767 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms