RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PRC1O43663 620 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 PRPF40AO75400 957 aaKnown RBP17.42■□□□□ 0.38
CAPN3-207ENST00000397200 MBD3O95983 291 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 F13A1P00488 732 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 ZNF445P59923 1031 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 IQCA1Q86XH1 822 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
CAPN3-207ENST00000397200 TRAF5O00463 557 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 MPHOSPH10O00566 681 aaKnown RBP17.41■□□□□ 0.38
CAPN3-207ENST00000397200 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-207ENST00000397200 AKR1B1P15121 316 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 MRE11P49959 708 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 ANTXR2P58335 489 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 ABCB5Q2M3G0 1257 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 FOXD4L5Q5VV16 416 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-207ENST00000397200 Q6ZUG5 572 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 FOXD4L4Q8WXT5 416 aaPredicted RBP17.41■□□□□ 0.38
CAPN3-207ENST00000397200 UBAC1Q9BSL1 405 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 ATAD5Q96QE3 1844 aa17.41■□□□□ 0.38
CAPN3-207ENST00000397200 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 GDF11O95390 407 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 FGD1P98174 961 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 PRKG1Q13976 671 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 SART3Q15020 963 aaKnown RBP17.4■□□□□ 0.38
CAPN3-207ENST00000397200 NEDD1Q8NHV4 660 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 ZKSCAN3Q9BRR0 538 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
CAPN3-207ENST00000397200 GREB1LQ9C091 1923 aaPredicted RBP17.4■□□□□ 0.38
CAPN3-207ENST00000397200 ERICH2A1L162 156 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.38
CAPN3-207ENST00000397200 RRP1BQ14684 758 aaKnown RBP17.39■□□□□ 0.38
CAPN3-207ENST00000397200 ZNF784Q8NCA9 323 aaPredicted RBP17.39■□□□□ 0.38
CAPN3-207ENST00000397200 TMEM87BQ96K49 555 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 WRNIP1Q96S55 665 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 ZSCAN10Q96SZ4 725 aaPredicted RBP17.39■□□□□ 0.38
CAPN3-207ENST00000397200 MTA3Q9BTC8 594 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 ZNF408Q9H9D4 720 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 ZNF112Q9UJU3 913 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 FZD1Q9UP38 647 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 ATP6V1DQ9Y5K8 247 aa17.39■□□□□ 0.38
CAPN3-207ENST00000397200 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 IFIT3O14879 490 aaKnown RBP17.39■□□□□ 0.37
CAPN3-207ENST00000397200 XRCC6P12956 609 aaKnown RBP eCLIP17.39■□□□□ 0.37
CAPN3-207ENST00000397200 PDCP20941 246 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 CAP2P40123 477 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 IREB2P48200 963 aaKnown RBP17.39■□□□□ 0.37
CAPN3-207ENST00000397200 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 TMEM179Q6ZVK1 233 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 KLRG1Q96E93 195 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 TCP11L1Q9NUJ3 509 aa17.39■□□□□ 0.37
CAPN3-207ENST00000397200 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 TNKSO95271 1327 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
CAPN3-207ENST00000397200 PFKFB2O60825 505 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 USP2O75604 605 aaPredicted RBP17.38■□□□□ 0.37
CAPN3-207ENST00000397200 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
CAPN3-207ENST00000397200 GH2P01242 217 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 EVCP57679 992 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
CAPN3-207ENST00000397200 TMEM67Q5HYA8 995 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 GAS2L3Q86XJ1 694 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 SMC1BQ8NDV3 1235 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 GRPEL1Q9HAV7 217 aa17.38■□□□□ 0.37
CAPN3-207ENST00000397200 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
CAPN3-207ENST00000397200 OTOFQ9HC10 1997 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 NMT2O60551 498 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 INPP5BP32019 993 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
CAPN3-207ENST00000397200 ARMC9Q7Z3E5 817 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 SMARCC2Q8TAQ2 1214 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
CAPN3-207ENST00000397200 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.37■□□□□ 0.37
CAPN3-207ENST00000397200 IL17RBQ9NRM6 502 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
CAPN3-207ENST00000397200 PAPPA2Q9BXP8 1791 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 TOMM70O94826 608 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 ASNSP08243 561 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 WTAPQ15007 396 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 SEPT2Q15019 361 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 PPP4R3BQ5MIZ7 849 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 CAVIN1Q6NZI2 390 aaKnown RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 ENAHQ8N8S7 591 aaPredicted RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 RBM46Q8TBY0 533 aaKnown RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 BRF1Q92994 677 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 CEP95Q96GE4 821 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 IGKV6D-41A0A0C4DH26 115 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 CELF2O95319 508 aaKnown RBP17.36■□□□□ 0.37
CAPN3-207ENST00000397200 JAG1P78504 1218 aa17.36■□□□□ 0.37
CAPN3-207ENST00000397200 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms