RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 AIFM3Q96NN9 605 aa15.53■□□□□ 0.08
PPARG-206ENST00000397012 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.53■□□□□ 0.08
PPARG-206ENST00000397012 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
PPARG-206ENST00000397012 TDRD3Q9H7E2 651 aaKnown RBP15.53■□□□□ 0.08
PPARG-206ENST00000397012 ATRNL1Q5VV63 1379 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 SHMT1P34896 483 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 MMP14P50281 582 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 FOSBP53539 338 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 CACNB3P54284 484 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 OTUD7BQ6GQQ9 843 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 TMTC3Q6ZXV5 915 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 SH3BP5LQ7L8J4 393 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 METTL16Q86W50 562 aaKnown RBP15.52■□□□□ 0.08
PPARG-206ENST00000397012 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 OGFOD1Q8N543 542 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 CTCFLQ8NI51 663 aaPredicted RBP15.52■□□□□ 0.08
PPARG-206ENST00000397012 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 GJB4Q9NTQ9 266 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 PI4KBQ9UBF8 816 aa15.52■□□□□ 0.08
PPARG-206ENST00000397012 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
PPARG-206ENST00000397012 IGKV6D-41A0A0C4DH26 115 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 PRPF3O43395 683 aaKnown RBP15.51■□□□□ 0.07
PPARG-206ENST00000397012 FIBPO43427 364 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 GADD45BO75293 160 aaPredicted RBP15.51■□□□□ 0.07
PPARG-206ENST00000397012 NCLP19338 710 aaKnown RBP15.51■□□□□ 0.07
PPARG-206ENST00000397012 KRT40Q6A162 431 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 CIAPIN1Q6FI81 312 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 CMTR1Q8N1G2 835 aaKnown RBP15.51■□□□□ 0.07
PPARG-206ENST00000397012 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 SPON1Q9HCB6 807 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 DDTLA6NHG4 134 aaPredicted RBP15.51■□□□□ 0.07
PPARG-206ENST00000397012 UBE2Q2LH0YL09 131 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 PLEKHA8P1O95397 391 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 KIF5BP33176 963 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 GUCY1A2P33402 732 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 UBE2HP62256 183 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 KIF23Q02241 960 aaPredicted RBP15.51■□□□□ 0.07
PPARG-206ENST00000397012 BRAPQ7Z569 592 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 CFAP45Q9UL16 551 aa15.51■□□□□ 0.07
PPARG-206ENST00000397012 TCP10Q12799 353 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 GRM4Q14833 912 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 DLGAP5Q15398 846 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 PKN1Q16512 942 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 FOXP4Q8IVH2 680 aaPredicted RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 SRBD1Q8N5C6 995 aaKnown RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 ZBED3Q96IU2 234 aaPredicted RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 CCDC17Q96LX7 622 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 DNAJC18Q9H819 358 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 TOP1P11387 765 aaKnown RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 TNIP1Q15025 636 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 FKBP1CQ5VVH2 108 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 CCDC82Q8N4S0 544 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 LEO1Q8WVC0 666 aaPredicted RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 GZF1Q9H116 711 aaPredicted RBP15.5■□□□□ 0.07
PPARG-206ENST00000397012 MTMR4Q9NYA4 1195 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 STX8Q9UNK0 236 aa15.5■□□□□ 0.07
PPARG-206ENST00000397012 CNTNAP5Q8WYK1 1306 aa15.49■□□□□ 0.07
PPARG-206ENST00000397012 AKR1B1P15121 316 aa15.49■□□□□ 0.07
PPARG-206ENST00000397012 U2AF2P26368 475 aaKnown RBP eCLIP15.49■□□□□ 0.075e-6■■■■□ 19.8
PPARG-206ENST00000397012 PRELPP51888 382 aa15.49■□□□□ 0.07
PPARG-206ENST00000397012 TRIM29Q14134 588 aa15.49■□□□□ 0.07
PPARG-206ENST00000397012 TATDN1Q6P1N9 297 aa15.49■□□□□ 0.07
PPARG-206ENST00000397012 KIF28PB7ZC32 967 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 FZD9O00144 591 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 GNAQP50148 359 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 SPDYE2Q495Y8 402 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 SPATA32Q96LK8 384 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 ZNF70Q9UC06 446 aaPredicted RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 MAD2L2Q9UI95 211 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 RCOR1Q9UKL0 485 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 PALM3A6NDB9 673 aaPredicted RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 MMP1P03956 469 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 RPS12P25398 132 aaKnown RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 AKAP17AQ02040 695 aaKnown RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 TMOD2Q9NZR1 351 aa15.48■□□□□ 0.07
PPARG-206ENST00000397012 V9GY48 417 aaPredicted RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
PPARG-206ENST00000397012 RASSF7Q02833 373 aa15.47■□□□□ 0.07
PPARG-206ENST00000397012 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
PPARG-206ENST00000397012 CAVIN1Q6NZI2 390 aaKnown RBP15.47■□□□□ 0.07
PPARG-206ENST00000397012 FAM151AQ8WW52 585 aa15.47■□□□□ 0.07
PPARG-206ENST00000397012 USP28Q96RU2 1077 aa15.47■□□□□ 0.07
PPARG-206ENST00000397012 RBM27Q9P2N5 1060 aaKnown RBP15.47■□□□□ 0.07
PPARG-206ENST00000397012 MYH4Q9Y623 1939 aa15.47■□□□□ 0.07
PPARG-206ENST00000397012 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
PPARG-206ENST00000397012 ZSCAN29Q8IWY8 852 aaPredicted RBP15.46■□□□□ 0.07
PPARG-206ENST00000397012 STAG2Q8N3U4 1231 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 RTEL1Q9NZ71 1219 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 TMEM63CQ9P1W3 806 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 CNTNAP1P78357 1384 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 BAZ2BQ9UIF8 2168 aaKnown RBP15.46■□□□□ 0.07
PPARG-206ENST00000397012 SMARCA1P28370 1054 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 PPP4R3BQ5MIZ7 849 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 DPF2Q92785 391 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 SHISA4Q96DD7 197 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 LZTS2Q9BRK4 669 aa15.46■□□□□ 0.07
PPARG-206ENST00000397012 FOXP1Q9H334 677 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms