RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ZNF579Q8NAF0 562 aaKnown RBP19.01■□□□□ 0.63
TRIM39-205ENST00000396551 OSBPL5Q9H0X9 879 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-205ENST00000396551 LRRC4BQ9NT99 713 aa19.01■□□□□ 0.63
TRIM39-205ENST00000396551 ATP1A3P13637 1013 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 NOM1Q5C9Z4 860 aaKnown RBP19■□□□□ 0.63
TRIM39-205ENST00000396551 TSC1Q92574 1164 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 FAM13BQ9NYF5 915 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 ANKIB1Q9P2G1 1089 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 MKRN1Q9UHC7 482 aaKnown RBP19■□□□□ 0.63
TRIM39-205ENST00000396551 SERTAD1Q9UHV2 236 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 POLR2DO15514 142 aaKnown RBP19■□□□□ 0.63
TRIM39-205ENST00000396551 PRR29P0C7W0 189 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 XBP1P17861 261 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 RCSD1Q6JBY9 416 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 TNFRSF25Q93038 417 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 C16orf45Q96MC5 204 aaPredicted RBP19■□□□□ 0.63
TRIM39-205ENST00000396551 GPR101Q96P66 508 aaPredicted RBP19■□□□□ 0.63
TRIM39-205ENST00000396551 CSRNP2Q9H175 543 aa19■□□□□ 0.63
TRIM39-205ENST00000396551 UBR3Q6ZT12 1888 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 SKILP12757 684 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 PDE4BQ07343 736 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 SPTY2D1Q68D10 685 aaPredicted RBP18.99■□□□□ 0.63
TRIM39-205ENST00000396551 MCM9Q9NXL9 1143 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 CEP131Q9UPN4 1083 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 LEMD3Q9Y2U8 911 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 USP27XA6NNY8 438 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 TPM4P67936 248 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 FANCCQ00597 558 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 TMED8Q6PL24 325 aaPredicted RBP18.99■□□□□ 0.63
TRIM39-205ENST00000396551 CNBD1Q8NA66 436 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 IMPACTQ9P2X3 320 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 SPATA31A6Q5VVP1 1343 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 NAV1Q8NEY1 1877 aa18.99■□□□□ 0.63
TRIM39-205ENST00000396551 RIOK3O14730 519 aaKnown RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 MYL5Q02045 173 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 GJD4Q96KN9 370 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 TRIM75PA6NK02 468 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 ACTN4O43707 911 aaKnown RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 POSTNQ15063 836 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 TMC6Q7Z403 805 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 GRAMD1CQ8IYS0 662 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 SH3RF3Q8TEJ3 882 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 MAN1B1Q9UKM7 699 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 MORC2Q9Y6X9 1032 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 LDHBP07195 334 aaKnown RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 VEGFAP15692 232 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 PRR5LQ6MZQ0 368 aa18.98■□□□□ 0.63
TRIM39-205ENST00000396551 CTCFLQ8NI51 663 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-205ENST00000396551 TSPY2A6NKD2 308 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 GSDMDP57764 484 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 DIXDC1Q155Q3 683 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 C12orf60Q5U649 245 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 WDR66Q8TBY9 1149 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 DPF2Q92785 391 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 XDHP47989 1333 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 PDILTQ8N807 584 aa18.97■□□□□ 0.63
TRIM39-205ENST00000396551 ADAMTS3O15072 1205 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 SARSP49591 514 aaKnown RBP18.96■□□□□ 0.63
TRIM39-205ENST00000396551 TPD52L1Q16890 204 aaPredicted RBP18.96■□□□□ 0.63
TRIM39-205ENST00000396551 NT5DC1Q5TFE4 455 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 ARMCX5Q6P1M9 558 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 DYNLL2Q96FJ2 89 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 A0A087X0B3 334 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 TNNT1P13805 278 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 OLFM4Q6UX06 510 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 IL17RBQ9NRM6 502 aa18.96■□□□□ 0.63
TRIM39-205ENST00000396551 GPSM2P81274 684 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.95■□□□□ 0.62
TRIM39-205ENST00000396551 USP5P45974 858 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 TFAP4Q01664 338 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 EPSTI1Q96J88 318 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 ROBO3Q96MS0 1386 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 SCG2P13521 617 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 C15orf52Q6ZUT6 534 aaKnown RBP18.95■□□□□ 0.62
TRIM39-205ENST00000396551 FANCLQ9NW38 375 aa18.95■□□□□ 0.62
TRIM39-205ENST00000396551 HOOK1Q9UJC3 728 aaKnown RBP18.95■□□□□ 0.62
TRIM39-205ENST00000396551 MORC3Q14149 939 aa18.94■□□□□ 0.62
TRIM39-205ENST00000396551 ZNF827Q17R98 1081 aa18.94■□□□□ 0.62
TRIM39-205ENST00000396551 ZNF174Q15697 407 aa18.94■□□□□ 0.62
TRIM39-205ENST00000396551 PFKFB3Q16875 520 aaPredicted RBP18.94■□□□□ 0.62
TRIM39-205ENST00000396551 ZNF804AQ7Z570 1209 aa18.94■□□□□ 0.62
TRIM39-205ENST00000396551 ZNF710Q8N1W2 664 aa18.94■□□□□ 0.62
TRIM39-205ENST00000396551 BRMS1Q9HCU9 246 aa18.94■□□□□ 0.62
TRIM39-205ENST00000396551 SMARCE1Q969G3 411 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 PDCL3Q9H2J4 239 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 GYS1P13807 737 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 PPP4CP60510 307 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 FMR1Q06787 632 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRIM39-205ENST00000396551 TTC38Q5R3I4 469 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 SPATA20Q8TB22 786 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 CERKQ8TCT0 537 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
TRIM39-205ENST00000396551 UBASH3AP57075 661 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 CRY2Q49AN0 593 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 CCDC150Q8NCX0 1101 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 KCND1Q9NSA2 647 aa18.93■□□□□ 0.62
TRIM39-205ENST00000396551 ADRA2BP18089 450 aa18.92■□□□□ 0.62
TRIM39-205ENST00000396551 NYAP1Q6ZVC0 841 aa18.92■□□□□ 0.62
TRIM39-205ENST00000396551 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms