RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TMEM57Q8N5G2 664 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 CABP5Q9NP86 173 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 SAP30BPQ9UHR5 308 aaKnown RBP21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 COL6A3P12111 3177 aa21.34■■□□□ 1.01
EXOSC3-202ENST00000396521 IDH1O75874 414 aaKnown RBP21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 HOXC6P09630 235 aa21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 SYN1P17600 705 aa21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 CATSPERGQ6ZRH7 1159 aa21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 PIH1D3Q9NQM4 214 aaKnown RBP21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 DBNLQ9UJU6 430 aaKnown RBP21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 STXBP5LQ9Y2K9 1186 aa21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 IVNS1ABPQ9Y6Y0 642 aa21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 ATAD5Q96QE3 1844 aa21.33■■□□□ 1.01
EXOSC3-202ENST00000396521 CERKLQ49MI3 558 aaPredicted RBP21.32■■□□□ 1
EXOSC3-202ENST00000396521 PTPREP23469 700 aa21.31■■□□□ 1
EXOSC3-202ENST00000396521 CCND3P30281 292 aaPredicted RBP21.31■■□□□ 1
EXOSC3-202ENST00000396521 DYNLL1P63167 89 aaKnown RBP21.31■■□□□ 1
EXOSC3-202ENST00000396521 CCL14Q16627 93 aa21.31■■□□□ 1
EXOSC3-202ENST00000396521 ABCB5Q2M3G0 1257 aa21.31■■□□□ 1
EXOSC3-202ENST00000396521 CUL9Q8IWT3 2517 aa21.31■■□□□ 1
EXOSC3-202ENST00000396521 ATP2B2Q01814 1243 aa21.3■■□□□ 1
EXOSC3-202ENST00000396521 RAB3GAP1Q15042 981 aa21.3■■□□□ 1
EXOSC3-202ENST00000396521 ERC1Q8IUD2 1116 aa21.3■■□□□ 1
EXOSC3-202ENST00000396521 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
EXOSC3-202ENST00000396521 HOXC10Q9NYD6 342 aa21.3■■□□□ 1
EXOSC3-202ENST00000396521 MAST2Q6P0Q8 1798 aa21.3■■□□□ 1
EXOSC3-202ENST00000396521 STRNO43815 780 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 PEX10O60683 326 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 VCAM1P19320 739 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 SHROOM1Q2M3G4 852 aaPredicted RBP21.29■■□□□ 1
EXOSC3-202ENST00000396521 POTEEQ6S8J3 1075 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 MAGEB6Q8N7X4 407 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 MIGA1Q8NAN2 632 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 LPAR1Q92633 364 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
EXOSC3-202ENST00000396521 TNNQ9UQP3 1299 aa21.29■■□□□ 1
EXOSC3-202ENST00000396521 PLXNB2O15031 1838 aa21.28■■□□□ 1
EXOSC3-202ENST00000396521 GRB14Q14449 540 aa21.28■■□□□ 1
EXOSC3-202ENST00000396521 TTF1Q15361 905 aaPredicted RBP21.28■■□□□ 1
EXOSC3-202ENST00000396521 LRRC26Q2I0M4 334 aa21.28■■□□□ 1
EXOSC3-202ENST00000396521 WDR78Q5VTH9 848 aa21.28■■□□□ 1
EXOSC3-202ENST00000396521 FAM109BQ6ICB4 259 aaPredicted RBP21.28■■□□□ 1
EXOSC3-202ENST00000396521 EAF2Q96CJ1 260 aaPredicted RBP21.28■■□□□ 1
EXOSC3-202ENST00000396521 CCDC8Q9H0W5 538 aaPredicted RBP21.28■■□□□ 1
EXOSC3-202ENST00000396521 MTMR10Q9NXD2 777 aa21.28■■□□□ 1
EXOSC3-202ENST00000396521 DDX20Q9UHI6 824 aaKnown RBP21.28■■□□□ 1
EXOSC3-202ENST00000396521 ALPK3Q96L96 1907 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 SIPA1L1O43166 1804 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 DDX60LQ5H9U9 1706 aaKnown RBP21.27■■□□□ 1
EXOSC3-202ENST00000396521 DNM1LO00429 736 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 CNMDO75829 334 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 HSP90AB4PQ58FF6 505 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 SLC5A4Q9NY91 659 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 PRKAG2Q9UGJ0 569 aa21.27■■□□□ 1
EXOSC3-202ENST00000396521 COG2Q14746 738 aa21.26■□□□□ 0.99
EXOSC3-202ENST00000396521 ZYXQ15942 572 aaKnown RBP21.26■□□□□ 0.99
EXOSC3-202ENST00000396521 MB21D1Q8N884 522 aa21.26■□□□□ 0.99
EXOSC3-202ENST00000396521 ARRDC4Q8NCT1 418 aa21.26■□□□□ 0.99
EXOSC3-202ENST00000396521 SENP6Q9GZR1 1112 aaPredicted RBP21.26■□□□□ 0.99
EXOSC3-202ENST00000396521 POLR3DP05423 398 aaPredicted RBP21.25■□□□□ 0.99
EXOSC3-202ENST00000396521 OLFML2BQ68BL8 750 aa21.25■□□□□ 0.99
EXOSC3-202ENST00000396521 SHCBP1Q8NEM2 672 aa21.25■□□□□ 0.99
EXOSC3-202ENST00000396521 CRNKL1Q9BZJ0 848 aaKnown RBP21.25■□□□□ 0.99
EXOSC3-202ENST00000396521 RPAP3Q9H6T3 665 aaPredicted RBP21.25■□□□□ 0.99
EXOSC3-202ENST00000396521 TLR7Q9NYK1 1049 aaKnown RBP21.25■□□□□ 0.99
EXOSC3-202ENST00000396521 SPDYE16A6NNV3 312 aaPredicted RBP21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 CNGA1P29973 690 aa21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 SHMT1P34896 483 aa21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 DPP9Q86TI2 863 aa21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 ITPRIPQ8IWB1 547 aa21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 ACER1Q8TDN7 264 aa21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 RIOK1Q9BRS2 568 aaKnown RBP21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 BTBD7Q9P203 1132 aa21.24■□□□□ 0.99
EXOSC3-202ENST00000396521 FOCADQ5VW36 1801 aa21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 MAGEB6P1A0A0J9YX57 407 aa21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 IGHA2P01877 340 aa21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 PLCD1P51178 756 aa21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 MDM2Q00987 491 aaPredicted RBP21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 GABPAQ06546 454 aa21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 FLRT1Q9NZU1 646 aa21.23■□□□□ 0.99
EXOSC3-202ENST00000396521 POTEB2H3BUK9 544 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 Q7L0L9 218 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 AACSQ86V21 672 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 ABRAQ8N0Z2 381 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 MROH8Q9H579 483 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 SH2D4AQ9H788 454 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 SWAP70Q9UH65 585 aa21.22■□□□□ 0.99
EXOSC3-202ENST00000396521 CYBAP13498 195 aa21.21■□□□□ 0.99
EXOSC3-202ENST00000396521 CYP2C19P33261 490 aa21.21■□□□□ 0.99
EXOSC3-202ENST00000396521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.21■□□□□ 0.99
EXOSC3-202ENST00000396521 ANTXR1Q9H6X2 564 aa21.21■□□□□ 0.99
EXOSC3-202ENST00000396521 MCM9Q9NXL9 1143 aa21.21■□□□□ 0.99
EXOSC3-202ENST00000396521 NDUFB9Q9Y6M9 179 aa21.21■□□□□ 0.99
EXOSC3-202ENST00000396521 GUCY1A2P33402 732 aa21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 SEPT2Q15019 361 aa21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 SLC9C2Q5TAH2 1124 aa21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 CEP85Q6P2H3 762 aa21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 TMEM179Q6ZVK1 233 aa21.2■□□□□ 0.98
EXOSC3-202ENST00000396521 NPLOC4Q8TAT6 608 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms