RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 CDK8P49336 464 aa23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 SLC9C1Q4G0N8 1177 aa23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 TREML2Q5T2D2 321 aa23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 OTUD7AQ8TE49 926 aaPredicted RBP23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 COA7Q96BR5 231 aa23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 KANSL2Q9H9L4 492 aa23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 MKNK2Q9HBH9 465 aa23.08■■□□□ 1.29
CDKN1B-202ENST00000396340 ROBO3Q96MS0 1386 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L15C9J2P7 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L13C9JLJ4 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L11C9JVI0 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L18D6R9N7 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L22D6RA61 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L17D6RBQ6 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L19D6RCP7 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L20D6RJB6 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 CAPN2P17655 700 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 PDE4BQ07343 736 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 USP17L24Q0WX57 530 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 B4GALNT3Q6L9W6 998 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 CCDC84Q86UT8 332 aaPredicted RBP23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 NAPBQ9H115 298 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 SRRDQ9UH36 339 aa23.07■■□□□ 1.28
CDKN1B-202ENST00000396340 TRIM6-TRIM34B2RNG4 842 aa23.06■■□□□ 1.28
CDKN1B-202ENST00000396340 IGHDP01880 384 aa23.06■■□□□ 1.28
CDKN1B-202ENST00000396340 IFNL3Q8IZI9 196 aa23.06■■□□□ 1.28
CDKN1B-202ENST00000396340 ARMC5Q96C12 935 aa23.06■■□□□ 1.28
CDKN1B-202ENST00000396340 RAET1EQ8TD07 263 aa23.05■■□□□ 1.28
CDKN1B-202ENST00000396340 MORF4L1Q9UBU8 362 aa23.05■■□□□ 1.28
CDKN1B-202ENST00000396340 SYNPO2Q9UMS6 1093 aa23.05■■□□□ 1.28
CDKN1B-202ENST00000396340 RBBP6Q7Z6E9 1792 aaKnown RBP23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 TNPO2O14787 897 aaKnown RBP23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 NT5C2P49902 561 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 HERVK_113P62684 666 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 CCNA1P78396 465 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 JAG1P78504 1218 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 ICA1Q05084 483 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 SEPT2Q15019 361 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 SLFNL1Q499Z3 407 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 MCMDC2Q4G0Z9 681 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 CCAR1Q8IX12 1150 aaKnown RBP23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 ZNF444Q8N0Y2 327 aaPredicted RBP23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 ANKRD13CQ8N6S4 541 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 TRIM47Q96LD4 638 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 EMILIN3Q9NT22 766 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 HOXC10Q9NYD6 342 aa23.04■■□□□ 1.28
CDKN1B-202ENST00000396340 MINDY4BA8MYZ0 360 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 LBX2Q6XYB7 198 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 PLEKHM2Q8IWE5 1019 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 GPRC5AQ8NFJ5 357 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 TMEM106CQ9BVX2 250 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 GOPCQ9HD26 462 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 MYPNQ86TC9 1320 aa23.03■■□□□ 1.28
CDKN1B-202ENST00000396340 M0R2C6 588 aa23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 MLLT1Q03111 559 aaPredicted RBP23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 IRF5Q13568 498 aa23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 SLAIN1Q8ND83 568 aa23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 DYNLL2Q96FJ2 89 aa23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 TMX2Q9Y320 296 aa23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 RABGAP1Q9Y3P9 1069 aa23.02■■□□□ 1.28
CDKN1B-202ENST00000396340 CYP2D6P10635 497 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 VCAM1P19320 739 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 MAPK4P31152 587 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 CATSPERGQ6ZRH7 1159 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 MB21D1Q8N884 522 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 PXYLP1Q8TE99 480 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
CDKN1B-202ENST00000396340 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
CDKN1B-202ENST00000396340 GUCY1A2P33402 732 aa23■■□□□ 1.27
CDKN1B-202ENST00000396340 UBXN2AP68543 259 aa23■■□□□ 1.27
CDKN1B-202ENST00000396340 COG2Q14746 738 aa23■■□□□ 1.27
CDKN1B-202ENST00000396340 ALX1Q15699 326 aa23■■□□□ 1.27
CDKN1B-202ENST00000396340 PTCH2Q9Y6C5 1203 aa23■■□□□ 1.27
CDKN1B-202ENST00000396340 ZMYM6O95789 1325 aa23■■□□□ 1.27
CDKN1B-202ENST00000396340 CHGBP05060 677 aa22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 GRK4P32298 578 aa22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 TRMT44Q8IYL2 757 aaKnown RBP22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 SLC44A5Q8NCS7 719 aa22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 SOCS4Q8WXH5 440 aa22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 P2RX7Q99572 595 aaKnown RBP22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 ARHGAP39Q9C0H5 1083 aa22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 VCPKMTQ9H867 229 aa22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 GREB1LQ9C091 1923 aaPredicted RBP22.99■■□□□ 1.27
CDKN1B-202ENST00000396340 MYH4Q9Y623 1939 aa22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 WDR46O15213 610 aaKnown RBP22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 AKR1B1P15121 316 aa22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 ZYXQ15942 572 aaKnown RBP22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 NKX2-3Q8TAU0 364 aa22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 ZNF333Q96JL9 665 aa22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 RPAP3Q9H6T3 665 aaPredicted RBP22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 NYAP2Q9P242 653 aa22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
CDKN1B-202ENST00000396340 ERVK-9P63128 1117 aa22.97■■□□□ 1.27
CDKN1B-202ENST00000396340 ERVK-24P63145 666 aa22.97■■□□□ 1.27
CDKN1B-202ENST00000396340 PPARAQ07869 468 aa22.97■■□□□ 1.27
CDKN1B-202ENST00000396340 ACER1Q8TDN7 264 aa22.97■■□□□ 1.27
CDKN1B-202ENST00000396340 CWC22Q9HCG8 908 aaKnown RBP22.97■■□□□ 1.27
CDKN1B-202ENST00000396340 EPB41L4AQ9HCS5 686 aaPredicted RBP22.97■■□□□ 1.27
CDKN1B-202ENST00000396340 DIAPH3Q9NSV4 1193 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms