RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 DPYDQ12882 1025 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 ANKRD7Q92527 254 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 TNNT1P13805 278 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 RHBDL3P58872 404 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 PPP4CP60510 307 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.527e-7■■■□□ 14.8
HIF1A-203ENST00000394997 DDR1Q08345 913 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 MORC3Q14149 939 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 TMED8Q6PL24 325 aaPredicted RBP11.83□□□□□ -0.52
HIF1A-203ENST00000394997 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 ZBTB9Q96C00 473 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 NAPBQ9H115 298 aa11.83□□□□□ -0.52
HIF1A-203ENST00000394997 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
HIF1A-203ENST00000394997 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
HIF1A-203ENST00000394997 PRR5LQ6MZQ0 368 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 MAD2L2Q9UI95 211 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 GAKO14976 1311 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 MAGEB6P1A0A0J9YX57 407 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 PCP11498 1178 aaKnown RBP11.82□□□□□ -0.52
HIF1A-203ENST00000394997 CYP7A1P22680 504 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 SRPRBQ9Y5M8 271 aaKnown RBP11.82□□□□□ -0.52
HIF1A-203ENST00000394997 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 DHX16O60231 1041 aaKnown RBP11.82□□□□□ -0.52
HIF1A-203ENST00000394997 E4F1Q66K89 784 aaPredicted RBP11.82□□□□□ -0.52
HIF1A-203ENST00000394997 KRBA2Q6ZNG9 492 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
HIF1A-203ENST00000394997 GOLGA8AA7E2F4 631 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 ATP1A3P13637 1013 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 PNOCQ13519 176 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 CUL4BQ13620 913 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 C12orf60Q5U649 245 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 RASGRP2Q7LDG7 609 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 TRMT1Q9NXH9 659 aaKnown RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 HOXA10P31260 410 aaPredicted RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 PRDM4Q9UKN5 801 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 ZNF652Q9Y2D9 606 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 IGKV6D-41A0A0C4DH26 115 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 CUTAO60888 179 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 RALYLQ86SE5 291 aaKnown RBP11.81□□□□□ -0.52
HIF1A-203ENST00000394997 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
HIF1A-203ENST00000394997 KIF20AO95235 890 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 DEXIO95424 95 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 KCNJ6P48051 423 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 POLRMTO00411 1230 aaKnown RBP11.8□□□□□ -0.52
HIF1A-203ENST00000394997 IFIT3O14879 490 aaKnown RBP11.8□□□□□ -0.52
HIF1A-203ENST00000394997 ME1P48163 572 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 DIS3L2Q8IYB7 885 aaKnown RBP11.8□□□□□ -0.52
HIF1A-203ENST00000394997 AOPEPQ8N6M6 819 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 FECHP22830 423 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
HIF1A-203ENST00000394997 GRAPQ13588 217 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
HIF1A-203ENST00000394997 XDHP47989 1333 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 DDAH1O94760 285 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 GPSM2P81274 684 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 SLC26A6Q9BXS9 759 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 TFCP2L1Q9NZI6 479 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 MAN1B1Q9UKM7 699 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 SLC12A7Q9Y666 1083 aa11.8□□□□□ -0.52
HIF1A-203ENST00000394997 WTAPQ15007 396 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
HIF1A-203ENST00000394997 FLT1P17948 1338 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 POLR3GO15318 223 aaPredicted RBP11.79□□□□□ -0.52
HIF1A-203ENST00000394997 PLCD1P51178 756 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 GABPAQ06546 454 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 RTN1Q16799 776 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
HIF1A-203ENST00000394997 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 USP17L21D6R901 530 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 PRDM1O75626 825 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
HIF1A-203ENST00000394997 SH3RF3Q8TEJ3 882 aaPredicted RBP11.79□□□□□ -0.52
HIF1A-203ENST00000394997 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
HIF1A-203ENST00000394997 GNPATO15228 680 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 TRIM65Q6PJ69 517 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 XPO4Q9C0E2 1151 aaKnown RBP11.78□□□□□ -0.52
HIF1A-203ENST00000394997 NYXQ9GZU5 481 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 CDKL5O76039 1030 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 TPM3P06753 285 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 USP17L8P0C7I0 530 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 SSRP1Q08945 709 aaKnown RBP11.78□□□□□ -0.52
HIF1A-203ENST00000394997 GPR101Q96P66 508 aaPredicted RBP11.78□□□□□ -0.52
HIF1A-203ENST00000394997 CSRNP2Q9H175 543 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 ANO10Q9NW15 660 aa11.78□□□□□ -0.52
HIF1A-203ENST00000394997 PCDHA5Q9Y5H7 936 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms