RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GJB1P08034 283 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 PTPRFP10586 1907 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 CCL5P13501 91 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 GJA8P48165 433 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 HERVK_113P62684 666 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 TRIM32Q13049 653 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 ZYXQ15942 572 aaKnown RBP10.71□□□□□ -0.69
ATG4A-205ENST00000394892 ABCB5Q2M3G0 1257 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
ATG4A-205ENST00000394892 C12orf60Q5U649 245 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 UBE2Q1Q7Z7E8 422 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 PI4K2BQ8TCG2 481 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
ATG4A-205ENST00000394892 CDK5RAP2Q96SN8 1893 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
ATG4A-205ENST00000394892 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L12C9JPN9 530 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L21D6R901 530 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 ADCY3O60266 1144 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 POLR3DP05423 398 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-205ENST00000394892 AKR1B1P15121 316 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 GCLCP48506 637 aaPredicted RBP10.7□□□□□ -0.7
ATG4A-205ENST00000394892 RAB3GAP1Q15042 981 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L2Q6R6M4 530 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 KBTBD3Q8NAB2 608 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 SLAIN1Q8ND83 568 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 STRBPQ96SI9 672 aaKnown RBP10.7□□□□□ -0.7
ATG4A-205ENST00000394892 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATG4A-205ENST00000394892 TRIM34Q9BYJ4 488 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 KIAA1683Q9H0B3 1180 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 PORCNQ9H237 461 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 FOCADQ5VW36 1801 aa10.7□□□□□ -0.7
ATG4A-205ENST00000394892 GSG1L2A8MUP6 293 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 M0R2C6 588 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 TNPO2O14787 897 aaKnown RBP10.69□□□□□ -0.7
ATG4A-205ENST00000394892 VCAM1P19320 739 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 CDK8P49336 464 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 IRF5Q13568 498 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 CTR9Q6PD62 1173 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 CATSPERGQ6ZRH7 1159 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 USP6NLQ92738 828 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
ATG4A-205ENST00000394892 EPB41L4AQ9HCS5 686 aaPredicted RBP10.69□□□□□ -0.7
ATG4A-205ENST00000394892 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 TMOD4Q9NZQ9 345 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 RBM27Q9P2N5 1060 aaKnown RBP10.69□□□□□ -0.7
ATG4A-205ENST00000394892 PNMA3Q9UL41 463 aa10.69□□□□□ -0.7
ATG4A-205ENST00000394892 FOXP2O15409 715 aa10.68□□□□□ -0.7
ATG4A-205ENST00000394892 RNF113AO15541 343 aaKnown RBP10.68□□□□□ -0.7
ATG4A-205ENST00000394892 EVI5O60447 810 aa10.68□□□□□ -0.7
ATG4A-205ENST00000394892 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
ATG4A-205ENST00000394892 TFRCP02786 760 aaKnown RBP10.68□□□□□ -0.7
ATG4A-205ENST00000394892 INHAP05111 366 aa10.68□□□□□ -0.7
ATG4A-205ENST00000394892 IRX3P78415 501 aaPredicted RBP10.68□□□□□ -0.7
ATG4A-205ENST00000394892 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATG4A-205ENST00000394892 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
ATG4A-205ENST00000394892 U2AF1L4Q8WU68 220 aaKnown RBP10.68□□□□□ -0.7
ATG4A-205ENST00000394892 BTBD7Q9P203 1132 aa10.68□□□□□ -0.7
ATG4A-205ENST00000394892 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
ATG4A-205ENST00000394892 SPDYE16A6NNV3 312 aaPredicted RBP10.67□□□□□ -0.7
ATG4A-205ENST00000394892 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 ERVK-24P63145 666 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 MORN1Q5T089 497 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 C16orf86Q6ZW13 317 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 GPRC5AQ8NFJ5 357 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 TRIB2Q92519 343 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.67□□□□□ -0.7
ATG4A-205ENST00000394892 TACC3Q9Y6A5 838 aa10.67□□□□□ -0.7
ATG4A-205ENST00000394892 A0A1W2PPC1 479 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 SGPL1O95470 568 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 IGHA2P01877 340 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 MNX1P50219 401 aaPredicted RBP10.66□□□□□ -0.7
ATG4A-205ENST00000394892 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 CCL14Q16627 93 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 LBX2Q6XYB7 198 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 SLC17A8Q8NDX2 589 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 APPBP2Q92624 585 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 COA7Q96BR5 231 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 PAGR1Q9BTK6 254 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 RPAP3Q9H6T3 665 aaPredicted RBP10.66□□□□□ -0.7
ATG4A-205ENST00000394892 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
ATG4A-205ENST00000394892 PAK6Q9NQU5 681 aaPredicted RBP10.66□□□□□ -0.7
ATG4A-205ENST00000394892 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 TTC41PQ6P2S7 1318 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 MPHOSPH10O00566 681 aaKnown RBP10.65□□□□□ -0.7
ATG4A-205ENST00000394892 GPAA1O43292 621 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 IGHDP01880 384 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 CYP2B6P20813 491 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 RASA1P20936 1047 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 USP14P54578 494 aa10.65□□□□□ -0.7
ATG4A-205ENST00000394892 HDAC1Q13547 482 aaPredicted RBP10.65□□□□□ -0.7
ATG4A-205ENST00000394892 SBK1Q52WX2 424 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms