RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 PLIN4Q96Q06 1357 aa22.63■■□□□ 1.21
TRPT1-203ENST00000394547 PCP11498 1178 aaKnown RBP22.62■■□□□ 1.21
TRPT1-203ENST00000394547 USP14P54578 494 aa22.62■■□□□ 1.21
TRPT1-203ENST00000394547 MTMR2Q13614 643 aa22.62■■□□□ 1.21
TRPT1-203ENST00000394547 SEPT2Q15019 361 aa22.62■■□□□ 1.21
TRPT1-203ENST00000394547 ZNF444Q8N0Y2 327 aaPredicted RBP22.62■■□□□ 1.21
TRPT1-203ENST00000394547 CTNNA3Q9UI47 895 aa22.62■■□□□ 1.21
TRPT1-203ENST00000394547 AGTPBP1Q9UPW5 1226 aa22.62■■□□□ 1.21
TRPT1-203ENST00000394547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRPT1-203ENST00000394547 FGRP09769 529 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 NT5C2P49902 561 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 HMGCS2P54868 508 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 GPAT2Q6NUI2 795 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 CASC1Q6TDU7 716 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 GADL1Q6ZQY3 521 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 KIAA1683Q9H0B3 1180 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 KANSL2Q9H9L4 492 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 ZFYVE28Q9HCC9 887 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 PRDM10Q9NQV6 1147 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 TMOD4Q9NZQ9 345 aa22.61■■□□□ 1.21
TRPT1-203ENST00000394547 PDHXO00330 501 aa22.6■■□□□ 1.21
TRPT1-203ENST00000394547 ICA1Q05084 483 aa22.6■■□□□ 1.21
TRPT1-203ENST00000394547 PABPC4Q13310 644 aaKnown RBP eCLIP22.6■■□□□ 1.21
TRPT1-203ENST00000394547 TAF1CQ15572 869 aaPredicted RBP22.6■■□□□ 1.21
TRPT1-203ENST00000394547 USP17L2Q6R6M4 530 aa22.6■■□□□ 1.21
TRPT1-203ENST00000394547 C12orf42Q96LP6 360 aa22.6■■□□□ 1.21
TRPT1-203ENST00000394547 SH2D4AQ9H788 454 aa22.6■■□□□ 1.21
TRPT1-203ENST00000394547 ARHGEF10LQ9HCE6 1279 aa22.6■■□□□ 1.21
TRPT1-203ENST00000394547 ZNF213O14771 459 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 ORC4O43929 436 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 CDC45O75419 566 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 LBX1P52954 281 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 CTDSPL2Q05D32 466 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 CRHR2Q13324 411 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 STK11IPQ8N1F8 1099 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 FEZ1Q99689 392 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 RNF41Q9H4P4 317 aaPredicted RBP22.59■■□□□ 1.21
TRPT1-203ENST00000394547 TSKSQ9UJT2 592 aa22.59■■□□□ 1.21
TRPT1-203ENST00000394547 PRDM1O75626 825 aa22.58■■□□□ 1.21
TRPT1-203ENST00000394547 TBC1D8O95759 1140 aa22.58■■□□□ 1.21
TRPT1-203ENST00000394547 IMMTQ16891 758 aaKnown RBP22.58■■□□□ 1.21
TRPT1-203ENST00000394547 STAG1Q8WVM7 1258 aa22.58■■□□□ 1.21
TRPT1-203ENST00000394547 PARK7Q99497 189 aaKnown RBP22.58■■□□□ 1.21
TRPT1-203ENST00000394547 ESYT1Q9BSJ8 1104 aa22.58■■□□□ 1.21
TRPT1-203ENST00000394547 PNMA3Q9UL41 463 aa22.58■■□□□ 1.21
TRPT1-203ENST00000394547 IGKV6D-41A0A0C4DH26 115 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 TSPY3P0CV98 308 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 TSPY8P0CW00 308 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 PPP4R3BQ5MIZ7 849 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 AKNAD1Q5T1N1 836 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 NEDD1Q8NHV4 660 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.57■■□□□ 1.2
TRPT1-203ENST00000394547 TMX2Q9Y320 296 aa22.57■■□□□ 1.2
TRPT1-203ENST00000394547 GPR25O00155 361 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 TLR2O60603 784 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 TREML2Q5T2D2 321 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 ACER1Q8TDN7 264 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 EMILIN3Q9NT22 766 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 NYAP2Q9P242 653 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 SYNPO2Q9UMS6 1093 aa22.56■■□□□ 1.2
TRPT1-203ENST00000394547 U3KPZ7 1027 aaPredicted RBP22.56■■□□□ 1.2
TRPT1-203ENST00000394547 A0A1W2PRG0 241 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 HOXA7P31268 230 aaPredicted RBP22.55■■□□□ 1.2
TRPT1-203ENST00000394547 HAND2P61296 217 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 MFSD6Q6ZSS7 791 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 KIAA1211Q6ZU35 1233 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 SIAH1Q8IUQ4 282 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 MAP4K1Q92918 833 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 NBPF3Q9H094 633 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 ADGRA2Q96PE1 1338 aa22.55■■□□□ 1.2
TRPT1-203ENST00000394547 TSPY2A6NKD2 308 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 EEF2P13639 858 aaKnown RBP22.54■■□□□ 1.2
TRPT1-203ENST00000394547 TFAP4Q01664 338 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 PTH1RQ03431 593 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 TBC1D10CQ8IV04 446 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 LPAR1Q92633 364 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 TACC3Q9Y6A5 838 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 MYH4Q9Y623 1939 aa22.54■■□□□ 1.2
TRPT1-203ENST00000394547 OSBPP22059 807 aa22.53■■□□□ 1.2
TRPT1-203ENST00000394547 DGKZQ13574 1117 aa22.53■■□□□ 1.2
TRPT1-203ENST00000394547 CLEC10AQ8IUN9 316 aa22.53■■□□□ 1.2
TRPT1-203ENST00000394547 R3HDMLQ9H3Y0 253 aa22.53■■□□□ 1.2
TRPT1-203ENST00000394547 MTMR4Q9NYA4 1195 aa22.53■■□□□ 1.2
TRPT1-203ENST00000394547 RANBP6O60518 1105 aaKnown RBP22.52■■□□□ 1.2
TRPT1-203ENST00000394547 FKTNO75072 461 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 TTLL1O95922 423 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 VCAM1P19320 739 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 ZYXQ15942 572 aaKnown RBP22.52■■□□□ 1.2
TRPT1-203ENST00000394547 FAM47AQ5JRC9 791 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 ZNF296Q8WUU4 475 aaPredicted RBP22.52■■□□□ 1.2
TRPT1-203ENST00000394547 MKL1Q969V6 931 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 CEP95Q96GE4 821 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 LSG1Q9H089 658 aaKnown RBP22.52■■□□□ 1.2
TRPT1-203ENST00000394547 VCPKMTQ9H867 229 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 TOMM22Q9NS69 142 aa22.52■■□□□ 1.2
TRPT1-203ENST00000394547 CYP2C8P10632 490 aa22.51■■□□□ 1.19
TRPT1-203ENST00000394547 C17orf99Q6UX52 265 aa22.51■■□□□ 1.19
TRPT1-203ENST00000394547 ESR2Q92731 530 aa22.51■■□□□ 1.19
TRPT1-203ENST00000394547 CNNM2Q9H8M5 875 aa22.51■■□□□ 1.19
TRPT1-203ENST00000394547 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms