RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 PPP2R2CQ9Y2T4 447 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
PSEN1-204ENST00000394164 NMT2O60551 498 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 IVLP07476 585 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 UBASH3AP57075 661 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 AXDND1Q5T1B0 1012 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-204ENST00000394164 SHC4Q6S5L8 630 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 TOGARAM2Q6ZUX3 1019 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
PSEN1-204ENST00000394164 CDKL5O76039 1030 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 IBSPP21815 317 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-204ENST00000394164 NTRK3Q16288 839 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 RTN1Q16799 776 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
PSEN1-204ENST00000394164 SRRTQ9BXP5 876 aaKnown RBP11.32□□□□□ -0.6
PSEN1-204ENST00000394164 DISP2A7MBM2 1401 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 ATP8B1O43520 1251 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
PSEN1-204ENST00000394164 PPARAQ07869 468 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-204ENST00000394164 LZTFL1Q9NQ48 299 aa11.32□□□□□ -0.6
PSEN1-204ENST00000394164 A0A0U1RQJ8 604 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 SLC39A14Q15043 492 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 LONRF3Q496Y0 759 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 CNNM3Q8NE01 707 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 ATRIPQ8WXE1 791 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 PNKPQ96T60 521 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
PSEN1-204ENST00000394164 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.6
PSEN1-204ENST00000394164 VPS54Q9P1Q0 977 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 COL4A1P02462 1669 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 LRP6O75581 1613 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 YEATS4O95619 227 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 TOP1P11387 765 aaKnown RBP11.31□□□□□ -0.6
PSEN1-204ENST00000394164 LIG3P49916 1009 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 PPM1EQ8WY54 764 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 ZNF512BQ96KM6 892 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-204ENST00000394164 ABCB6Q9NP58 842 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
PSEN1-204ENST00000394164 TXLNAP40222 546 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
PSEN1-204ENST00000394164 JAKMIP3Q5VZ66 844 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 USP49Q70CQ1 688 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 DHX37Q8IY37 1157 aaKnown RBP11.3□□□□□ -0.6
PSEN1-204ENST00000394164 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
PSEN1-204ENST00000394164 PCDHB6Q9Y5E3 794 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 TNKSO95271 1327 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MYH14Q7Z406 1995 aaKnown RBP11.3□□□□□ -0.6
PSEN1-204ENST00000394164 CYP2D6P10635 497 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MNAT1P51948 309 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MTF1Q14872 753 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 PARP10Q53GL7 1025 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 RSRC2Q7L4I2 434 aaKnown RBP11.3□□□□□ -0.6
PSEN1-204ENST00000394164 AMIGO3Q86WK7 504 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 TRIM22Q8IYM9 498 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 ZNF654Q8IZM8 581 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MINPP1Q9UNW1 487 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MYH7P12883 1935 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 A0A1W2PQ27 194 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 A0A1W2PQ64 194 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 A0A1W2PQD8 194 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 GNPATO15228 680 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 CCP110O43303 1012 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 CASP1P29466 404 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 CHMP4BP1P59074 171 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 TXNRD3Q86VQ6 643 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 FBXL16Q8N461 479 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 KRT23Q9C075 422 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 PSD3Q9NYI0 1048 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 MYH3P11055 1940 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 ABCC12Q96J65 1359 aa11.3□□□□□ -0.6
PSEN1-204ENST00000394164 USP17L12C9JPN9 530 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 USP17L21D6R901 530 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 COBLO75128 1261 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 PLEKHA8P1O95397 391 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 CMA1P23946 247 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 PRDX5P30044 214 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 CORO7P57737 925 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 DHX8Q14562 1220 aaKnown RBP11.29□□□□□ -0.6
PSEN1-204ENST00000394164 NCAPHQ15003 741 aa11.29□□□□□ -0.6
PSEN1-204ENST00000394164 SAFBQ15424 915 aaKnown RBP eCLIP11.29□□□□□ -0.6
PSEN1-204ENST00000394164 HSP90B2PQ58FF3 399 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms