RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 MYH7BA7E2Y1 1941 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 TBC1D12O60347 775 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 TMEM47Q9BQJ4 181 aa12.68□□□□□ -0.38
PDGFD-202ENST00000393158 TCP10L2B9ZVM9 353 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 PLEKHA8P1O95397 391 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 MMP14P50281 582 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
PDGFD-202ENST00000393158 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
PDGFD-202ENST00000393158 CNTNAP5Q8WYK1 1306 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 PTPDC1A2A3K4 754 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
PDGFD-202ENST00000393158 CHMP5Q9NZZ3 219 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 GOLGA8BA8MQT2 603 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 TBC1D10BQ4KMP7 808 aaPredicted RBP12.67□□□□□ -0.38
PDGFD-202ENST00000393158 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
PDGFD-202ENST00000393158 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
PDGFD-202ENST00000393158 DLGAP5Q15398 846 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 PDE4BQ07343 736 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 CCDC144CPQ8IYA2 1237 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 PHKBQ93100 1093 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 DNAH12Q6ZR08 3092 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 TRPM7Q96QT4 1865 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
PDGFD-202ENST00000393158 NT5C2P49902 561 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 WTAPQ15007 396 aa12.66□□□□□ -0.38
PDGFD-202ENST00000393158 POLR3DP05423 398 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-202ENST00000393158 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 MKL1Q969V6 931 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 RNF181Q9P0P0 153 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 KIF4BQ2VIQ3 1234 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 KIF28PB7ZC32 967 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 IFNAR1P17181 557 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDGFD-202ENST00000393158 TRDNQ13061 729 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 TYW1BQ6NUM6 668 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 CRACR2BQ8N4Y2 399 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-202ENST00000393158 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
PDGFD-202ENST00000393158 STK36Q9NRP7 1315 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 RASA3Q14644 834 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 TMTC3Q6ZXV5 915 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 ZNF112Q9UJU3 913 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 GJA3Q9Y6H8 435 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 M0R2N6 131 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 ZBTB43O43298 467 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 STX6O43752 255 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 RESTQ13127 1097 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 GRM4Q14833 912 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 NFKBIBQ15653 356 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
PDGFD-202ENST00000393158 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
PDGFD-202ENST00000393158 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
PDGFD-202ENST00000393158 DDAH1O94760 285 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 PDHBP11177 359 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 FGD1P98174 961 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 IFIT1BQ5T764 474 aaKnown RBP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 OGFOD1Q8N543 542 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
PDGFD-202ENST00000393158 TNFRSF25Q93038 417 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 DDX11Q96FC9 970 aa12.63□□□□□ -0.39
PDGFD-202ENST00000393158 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
PDGFD-202ENST00000393158 LRRC37A2A6NM11 1700 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
PDGFD-202ENST00000393158 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 MTMR8Q96EF0 704 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 HDAC9Q9UKV0 1011 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 EDIL3O43854 480 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 GDF11O95390 407 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 TSPY3P0CV98 308 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 TSPY8P0CW00 308 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 ANGEL2Q5VTE6 544 aaKnown RBP12.62□□□□□ -0.39
PDGFD-202ENST00000393158 PRAMEF18Q5VWM3 479 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
PDGFD-202ENST00000393158 RGS22Q8NE09 1264 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 HERC5Q9UII4 1024 aaKnown RBP12.62□□□□□ -0.39
PDGFD-202ENST00000393158 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
PDGFD-202ENST00000393158 USP17L5A8MUK1 530 aa12.61□□□□□ -0.39
PDGFD-202ENST00000393158 BAG4O95429 457 aaKnown RBP12.61□□□□□ -0.39
PDGFD-202ENST00000393158 SEPT2Q15019 361 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms