RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IDI2Q9BXS1 227 aa13.27□□□□□ -0.29
SMARCAL1-203ENST00000392128 RTEL1Q9NZ71 1219 aa13.27□□□□□ -0.29
SMARCAL1-203ENST00000392128 SWAP70Q9UH65 585 aa13.27□□□□□ -0.29
SMARCAL1-203ENST00000392128 SIPA1L1O43166 1804 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 NOVP48745 357 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 MRE11P49959 708 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 LARGE2Q8N3Y3 721 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 CCDC82Q8N4S0 544 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 POLR3EQ9NVU0 708 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
SMARCAL1-203ENST00000392128 GOLGA6L4A6NEF3 574 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 MMP1P03956 469 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 NFIAQ12857 509 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 PGBD1Q96JS3 809 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 EHD4Q9H223 541 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 SYCE3A1L190 88 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 HLA-DOAP06340 250 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 GRM4Q14833 912 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 PKN1Q16512 942 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 LRSAM1Q6UWE0 723 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 GRPEL1Q9HAV7 217 aa13.25□□□□□ -0.29
SMARCAL1-203ENST00000392128 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 YEATS4O95619 227 aa13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 VIL1P09327 827 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 CEBPZQ03701 1054 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 R3HDM1Q15032 1099 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 TMEM47Q9BQJ4 181 aa13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 DHX36Q9H2U1 1008 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 STX8Q9UNK0 236 aa13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 PCDHAC2Q9Y5I4 1007 aa13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 XBP1P17861 261 aa13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 GNL2Q13823 731 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-203ENST00000392128 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 GNAQP50148 359 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 LINC00301Q8NCQ3 95 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 GMLQ99445 158 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 CD2APQ9Y5K6 639 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 PSMD14O00487 310 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 CFAP100Q494V2 611 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 NIM1KQ8IY84 436 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 KCNG4Q8TDN1 519 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 CLIC4Q9Y696 253 aa13.23□□□□□ -0.29
SMARCAL1-203ENST00000392128 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 LIG1P18858 919 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 SHMT1P34896 483 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 NOSTRINQ8IVI9 506 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 DIS3L2Q8IYB7 885 aaKnown RBP13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 KCNJ14Q9UNX9 436 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 ENTPD3O75355 529 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 RAD17O75943 681 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 UPF1Q92900 1129 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 PHF20Q9BVI0 1012 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 ATRNL1Q5VV63 1379 aa13.22□□□□□ -0.29
SMARCAL1-203ENST00000392128 PALM3A6NDB9 673 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 BTBD18B2RXH4 712 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 AKR1B1P15121 316 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 CACNB3P54284 484 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 STK38Q15208 465 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 PFKFB3Q16875 520 aaPredicted RBP13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 DDX19AQ9NUU7 478 aaKnown RBP13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
SMARCAL1-203ENST00000392128 SCG2P13521 617 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 ME1P48163 572 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 AGBL3Q8NEM8 1001 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 CCDC17Q96LX7 622 aa13.21□□□□□ -0.3
SMARCAL1-203ENST00000392128 TDRD3Q9H7E2 651 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms