RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 MIGA2Q7L4E1 593 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
TRAV17-201ENST00000390445 ZKSCAN4Q969J2 545 aaPredicted RBP10.37□□□□□ -0.75
TRAV17-201ENST00000390445 WRNIP1Q96S55 665 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 GDPD2Q9HCC8 539 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 TMOD2Q9NZR1 351 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 SUGT1Q9Y2Z0 365 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 TRIM17Q9Y577 477 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 SNCAIPQ9Y6H5 919 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 RPAP1Q9BWH6 1393 aaPredicted RBP10.37□□□□□ -0.75
TRAV17-201ENST00000390445 MYH8P13535 1937 aa10.37□□□□□ -0.75
TRAV17-201ENST00000390445 CCL15-CCL14A0A0B4J2E2 113 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 CCL15Q16663 113 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 CCDC102BQ68D86 513 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 CDC42EP5Q6NZY7 148 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 FBXO46Q6PJ61 603 aaPredicted RBP10.36□□□□□ -0.75
TRAV17-201ENST00000390445 FAM83AQ86UY5 434 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 CD99L2Q8TCZ2 262 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 BRI3BPQ8WY22 251 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 ARHGAP45Q92619 1136 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 MRIQ9BWK5 157 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 CSADQ9Y600 493 aa10.36□□□□□ -0.75
TRAV17-201ENST00000390445 MYH7P12883 1935 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 PNMA6EA0A0J9YXQ4 647 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 A0A1B0GUL7 405 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 LDHBP07195 334 aaKnown RBP10.35□□□□□ -0.75
TRAV17-201ENST00000390445 SLURP2P0DP57 97 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 INPP5BP32019 993 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 TFCP2Q12800 502 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 RASGRF1Q13972 1273 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 PKN2Q16513 984 aaKnown RBP10.35□□□□□ -0.75
TRAV17-201ENST00000390445 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 OTOP1Q7RTM1 612 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 ZFPM1Q8IX07 1006 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 DENND2AQ9ULE3 1009 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
TRAV17-201ENST00000390445 SALL1Q9NSC2 1324 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 APBB1O00213 710 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 GNAI3P08754 354 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 MTX1Q13505 466 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 TAF1CQ15572 869 aaPredicted RBP10.34□□□□□ -0.75
TRAV17-201ENST00000390445 FKBP1CQ5VVH2 108 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 OTUD7BQ6GQQ9 843 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 LIAT1Q6ZQX7 453 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 FAM151AQ8WW52 585 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 XAGE2Q96GT9 111 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 USP40Q9NVE5 1235 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 GNL3LQ9NVN8 582 aaKnown RBP10.34□□□□□ -0.75
TRAV17-201ENST00000390445 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
TRAV17-201ENST00000390445 GTF2A2P52657 109 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRAV17-201ENST00000390445 ERO1BQ86YB8 467 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 ZNF341Q9BYN7 854 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 FKBPLQ9UIM3 349 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 HDAC5Q9UQL6 1122 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 RFX7Q2KHR2 1363 aa10.33□□□□□ -0.76
TRAV17-201ENST00000390445 ATRNL1Q5VV63 1379 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 BTBD19C9JJ37 291 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
TRAV17-201ENST00000390445 GNAI2P04899 355 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 RGS3P49796 1198 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 SP3Q02447 781 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 DCAF15Q66K64 600 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 SH3BP5LQ7L8J4 393 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.32□□□□□ -0.76
TRAV17-201ENST00000390445 ZNF384Q8TF68 577 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 ERO1AQ96HE7 468 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 ARHGAP39Q9C0H5 1083 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 PTPN22Q9Y2R2 807 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 NAV1Q8NEY1 1877 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 GAKO14976 1311 aa10.32□□□□□ -0.76
TRAV17-201ENST00000390445 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
TRAV17-201ENST00000390445 RLBP1P12271 317 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 ABL2P42684 1182 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 TRIM32Q13049 653 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 PPIL2Q13356 520 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 PICALMQ13492 652 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 IRF5Q13568 498 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 LINC01559Q495D7 138 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 ZKSCAN2Q63HK3 967 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
TRAV17-201ENST00000390445 EFCC1Q9HA90 598 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 ZFYVE28Q9HCC9 887 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
TRAV17-201ENST00000390445 HMG20BQ9P0W2 317 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.31□□□□□ -0.76
TRAV17-201ENST00000390445 ZNF112Q9UJU3 913 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
TRAV17-201ENST00000390445 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
TRAV17-201ENST00000390445 WDHD1O75717 1129 aaPredicted RBP10.3□□□□□ -0.76
TRAV17-201ENST00000390445 CETPP11597 493 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms