RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 SRRTQ9BXP5 876 aaKnown RBP5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 ANGEL1Q9UNK9 670 aaKnown RBP5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 CEP131Q9UPN4 1083 aa5.3□□□□□ -1.56
RNU6-39P-201ENST00000384344 MEIS3P2A8K0S8 358 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 SSBP05455 408 aaKnown RBP eCLIP5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 ITIH2P19823 946 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 SSTR4P31391 388 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 CCNFP41002 786 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 NASPP49321 788 aaPredicted RBP5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 ARID5AQ03989 594 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 LRP8Q14114 963 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 CDCP2Q5VXM1 449 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 MFSD4AQ8N468 514 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 NETO1Q8TDF5 533 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 DHRS1Q96LJ7 313 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 PCMTD2Q9NV79 361 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 BSDC1Q9NW68 430 aaPredicted RBP5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 KCNH3Q9ULD8 1083 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 PPT2Q9UMR5 302 aa5.29□□□□□ -1.56
RNU6-39P-201ENST00000384344 TMEM265A0A087WTH1 108 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 RGS13O14921 159 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 EOMESO95936 686 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 CEACAM5P06731 702 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 ITGB7P26010 798 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 IFI16Q16666 785 aaKnown RBP5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 CDH24Q86UP0 819 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 SHISA5Q8N114 240 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 STK11IPQ8N1F8 1099 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 FAM181AQ8N9Y4 354 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 ATG4CQ96DT6 458 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 MISP3Q96FF7 219 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 KIF2CQ99661 725 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.28□□□□□ -1.561e-10■■■■□ 20.6
RNU6-39P-201ENST00000384344 ASPNQ9BXN1 380 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 CNNM2Q9H8M5 875 aa5.28□□□□□ -1.56
RNU6-39P-201ENST00000384344 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 CLEC3AO75596 197 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 CBX7O95931 251 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 NME1P15531 152 aaKnown RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 DNAJA1P31689 397 aaKnown RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 CD97P48960 835 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 CLCN7P51798 805 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 INTS3Q68E01 1043 aaKnown RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 CCDC81Q6ZN84 652 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 C22orf34Q6ZV56 151 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 TAB3Q8N5C8 712 aaPredicted RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 SLC43A3Q8NBI5 491 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 RBBP8NLQ8NC74 664 aaPredicted RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 DNAJB8Q8NHS0 232 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 RNF141Q8WVD5 230 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 HRASLS5Q96KN8 279 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 ASCC2Q9H1I8 757 aaPredicted RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 ZC3H7BQ9UGR2 993 aaKnown RBP5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 SNX11Q9Y5W9 270 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 SLC12A7Q9Y666 1083 aa5.27□□□□□ -1.57
RNU6-39P-201ENST00000384344 TNFRSF10CO14798 259 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 DNAJA2O60884 412 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 GUCY2CP25092 1073 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 HOXA10P31260 410 aaPredicted RBP5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 OXCT1P55809 520 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 BBS9Q3SYG4 887 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 NAALADL2Q58DX5 795 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 VSIG10LQ86VR7 867 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 RIN3Q8TB24 985 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 BAHD1Q8TBE0 780 aaPredicted RBP5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 PIWIL2Q8TC59 973 aaKnown RBP5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 HEXIM2Q96MH2 286 aaKnown RBP5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 KREMEN1Q96MU8 473 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 C8orf37Q96NL8 207 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 TINF2Q9BSI4 451 aa5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 TRIT1Q9H3H1 467 aaKnown RBP5.26□□□□□ -1.57
RNU6-39P-201ENST00000384344 KIAA1324LA8MWY0 1029 aaPredicted RBP5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 ZNF865P0CJ78 1059 aaPredicted RBP5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 GIPRP48546 466 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 MSMPQ1L6U9 139 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 TNNI3KQ59H18 835 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 FAM214BQ7L5A3 538 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 LSRQ86X29 649 aaPredicted RBP5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 DTX1Q86Y01 620 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 C19orf47Q8N9M1 422 aaKnown RBP5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 ASB11Q8WXH4 323 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 ANAPC16Q96DE5 110 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 ANTXR1Q9H6X2 564 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 ZFP64Q9NPA5 681 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 VAV3Q9UKW4 847 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 SLC5A6Q9Y289 635 aa5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 R3HCC1Q9Y3T6 440 aaKnown RBP5.25□□□□□ -1.57
RNU6-39P-201ENST00000384344 WNT11O96014 354 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 PRNPP04156 253 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 SPINK2P20155 84 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 PRKCQQ04759 706 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 PPP2R5EQ16537 467 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 ARTNQ5T4W7 220 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 CDKAL1Q5VV42 579 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 NBPF11Q86T75 865 aa5.24□□□□□ -1.57
RNU6-39P-201ENST00000384344 KRTAP1-3Q8IUG1 177 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms