RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 LRRN4CLQ8ND94 238 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 FBXO18Q8NFZ0 1043 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 ERCC4Q92889 916 aaPredicted RBP10.21□□□□□ -0.78
GPNMB-202ENST00000381990 C8orf76Q96K31 380 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 LY9Q9HBG7 655 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 TUBE1Q9UJT0 475 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 KIAA1551Q9HCM1 1747 aa10.21□□□□□ -0.78
GPNMB-202ENST00000381990 URI1O94763 535 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 SART3Q15020 963 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 TMC4Q7Z404 712 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 SLC51AQ86UW1 340 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 COL23A1Q86Y22 540 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 CRNKL1Q9BZJ0 848 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 ARFGAP3Q9NP61 516 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 BAZ2AQ9UIF9 1905 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 MINDY4BA8MYZ0 360 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 CDKL5O76039 1030 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 UFL1O94874 794 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 SERPINC1P01008 464 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 FOSBP53539 338 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 RRP12Q5JTH9 1297 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 CC2D1AQ6P1N0 951 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 CPLX2Q6PUV4 134 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 NFXL1Q6ZNB6 911 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 DZIP1Q86YF9 867 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 RAB11FIP4Q86YS3 637 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 VSTM4Q8IW00 320 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 REXO1L1PQ8IX06 675 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 JMYQ8N9B5 988 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 TOMM22Q9NS69 142 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 PSD3Q9NYI0 1048 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 CWC15Q9P013 229 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 GGA1Q9UJY5 639 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 ZBTB43O43298 467 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 PCP11498 1178 aaKnown RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 LMOD1P29536 600 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-202ENST00000381990 TUBB4BP68371 445 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 ANO1Q5XXA6 986 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 RABGGTAQ92696 567 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 HSD3B7Q9H2F3 369 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 SENP2Q9HC62 589 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 CLIC4Q9Y696 253 aa10.2□□□□□ -0.78
GPNMB-202ENST00000381990 NRXN2Q9P2S2 1712 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 ANKRD31Q8N7Z5 1873 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 STX10O60499 249 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 TBC1D8O95759 1140 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 LDHBP07195 334 aaKnown RBP10.19□□□□□ -0.78
GPNMB-202ENST00000381990 PFKFB1P16118 471 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 GUCY1B3Q02153 619 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 RAD51AP2Q09MP3 1159 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 CFAP100Q494V2 611 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 AXDND1Q5T1B0 1012 aaPredicted RBP10.19□□□□□ -0.78
GPNMB-202ENST00000381990 TMTC2Q8N394 836 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 CARD6Q9BX69 1037 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 AATFQ9NY61 560 aaKnown RBP eCLIP10.19□□□□□ -0.78
GPNMB-202ENST00000381990 SLC12A7Q9Y666 1083 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 LRRC37AA6NMS7 1700 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 DUOX1Q9NRD9 1551 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 FAM237AA0A1B0GTK4 181 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 ERICH2A1L162 156 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 PPFIA3O75145 1194 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 PPP6R2O75170 966 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 CAPN2P17655 700 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 CASQ1P31415 396 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 SMC1AQ14683 1233 aaKnown RBP10.19□□□□□ -0.78
GPNMB-202ENST00000381990 MICU3Q86XE3 530 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 ELOA2Q8IYF1 753 aaPredicted RBP10.19□□□□□ -0.78
GPNMB-202ENST00000381990 ESR2Q92731 530 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 EXOC4Q96A65 974 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 JAG2Q9Y219 1238 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 PPP2R2CQ9Y2T4 447 aa10.19□□□□□ -0.78
GPNMB-202ENST00000381990 NID2Q14112 1375 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 VWA3AA6NCI4 1184 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 GOLGA8AA7E2F4 631 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 SYKP43405 635 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 GSTO1P78417 241 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 WTAPQ15007 396 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 SLC39A14Q15043 492 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 OLFM4Q6UX06 510 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 RSRC2Q7L4I2 434 aaKnown RBP10.18□□□□□ -0.78
GPNMB-202ENST00000381990 MSL3Q8N5Y2 521 aaKnown RBP10.18□□□□□ -0.78
GPNMB-202ENST00000381990 GPR101Q96P66 508 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-202ENST00000381990 CD209Q9NNX6 404 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 MRFAP1Q9Y605 127 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 RGPD3A6NKT7 1758 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-202ENST00000381990 RGPD4Q7Z3J3 1758 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 CCDC151A5D8V7 595 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 BIN1O00499 593 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 FGRP09769 529 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 ATP1A3P13637 1013 aa10.18□□□□□ -0.78
GPNMB-202ENST00000381990 IL1R1P14778 569 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms