RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3F-202ENST00000381565 CEP290O15078 2479 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 ROBO3Q96MS0 1386 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 FOXP2O15409 715 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 GH2P01242 217 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 PDE4AP27815 886 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 TREML2Q5T2D2 321 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 GADL1Q6ZQY3 521 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 OSBPL3Q9H4L5 887 aa13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 FARP1Q9Y4F1 1045 aaPredicted RBP13.87□□□□□ -0.19
APOBEC3F-202ENST00000381565 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 USP17L21D6R901 530 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 TLR2O60603 784 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 CTGFP29279 349 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 GUCY1A2P33402 732 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 HMGCS2P54868 508 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 MTMR2Q13614 643 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 CTR9Q6PD62 1173 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 EVI5LQ96CN4 794 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 SHISA4Q96DD7 197 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 TMEM106CQ9BVX2 250 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 GINM1Q9NU53 330 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 AGTPBP1Q9UPW5 1226 aa13.86□□□□□ -0.19
APOBEC3F-202ENST00000381565 MYCP01106 439 aaPredicted RBP13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 CYP2C8P10632 490 aa13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 CERKLQ49MI3 558 aaPredicted RBP13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 CCDC129Q6ZRS4 1044 aa13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 FASTKD5Q7L8L6 764 aaKnown RBP13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 AS3MTQ9HBK9 375 aa13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 SLC45A1Q9Y2W3 748 aa13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 TRIOBPQ9H2D6 2365 aa13.85□□□□□ -0.19
APOBEC3F-202ENST00000381565 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 H0YGN5 161 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 BACE1P56817 501 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 ABCB5Q2M3G0 1257 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 SBK1Q52WX2 424 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 C17orf99Q6UX52 265 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 CPA4Q9UI42 421 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 TAOK2Q9UL54 1235 aa13.84□□□□□ -0.19
APOBEC3F-202ENST00000381565 BCRP11274 1271 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 AKR1B1P15121 316 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 CDK8P49336 464 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 SEPT2Q15019 361 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 CLEC10AQ8IUN9 316 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 ACER1Q8TDN7 264 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 FAM227BQ96M60 508 aa13.83□□□□□ -0.2
APOBEC3F-202ENST00000381565 USP17L10C9JJH3 530 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 GNAT2P19087 354 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 RAB3GAP1Q15042 981 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 MTFR1Q15390 333 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 TRIM47Q96LD4 638 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 EMILIN3Q9NT22 766 aa13.82□□□□□ -0.2
APOBEC3F-202ENST00000381565 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 C19orf81C9J6K1 198 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 PATL2C9JE40 543 aaKnown RBP13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 TDO2P48775 406 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 UBE2Q1Q7Z7E8 422 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
APOBEC3F-202ENST00000381565 LAMA3Q16787 3333 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 MPHOSPH10O00566 681 aaKnown RBP13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 RASA1P20936 1047 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 ZYXQ15942 572 aaKnown RBP13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 SIAH1Q8IUQ4 282 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 ASCC2Q9H1I8 757 aaPredicted RBP13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
APOBEC3F-202ENST00000381565 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms