RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 COL4A5P29400 1685 aa13.31□□□□□ -0.28
PITRM1-202ENST00000380989 B4E1Z4 1266 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 RAD17O75943 681 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 GNL2Q13823 731 aaKnown RBP13.3□□□□□ -0.28
PITRM1-202ENST00000380989 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 CLIC4Q9Y696 253 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
PITRM1-202ENST00000380989 C10orf67Q8IYJ2 551 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 SAP30BPQ9UHR5 308 aaKnown RBP13.3□□□□□ -0.28
PITRM1-202ENST00000380989 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
PITRM1-202ENST00000380989 SUGCTQ9HAC7 445 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
PITRM1-202ENST00000380989 SNED1Q8TER0 1413 aa13.3□□□□□ -0.28
PITRM1-202ENST00000380989 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 BTDP43251 543 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 STX1AQ16623 288 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 MAPKAPK5Q8IW41 473 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 TGFBRAP1Q8WUH2 860 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 PCDHA7Q9UN72 937 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
PITRM1-202ENST00000380989 MYH2Q9UKX2 1941 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 PTPDC1A2A3K4 754 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 USP17L12C9JPN9 530 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 USP17L21D6R901 530 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 H2AFXP16104 143 aaPredicted RBP13.29□□□□□ -0.28
PITRM1-202ENST00000380989 PSMA5P28066 241 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 CACNB3P54284 484 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 KRBA2Q6ZNG9 492 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 EYA3Q99504 573 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 RXRAP19793 462 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 CYP2C19P33261 490 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 ANTXR2P58335 489 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
PITRM1-202ENST00000380989 RTFDC1Q9BY42 306 aaPredicted RBP13.29□□□□□ -0.28
PITRM1-202ENST00000380989 TM6SF1Q9BZW5 370 aa13.29□□□□□ -0.28
PITRM1-202ENST00000380989 CCDC88AQ3V6T2 1871 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 PDCP20941 246 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 FOXR1Q6PIV2 292 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 MRFAP1L1Q96HT8 127 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 FAM53CQ9NYF3 392 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
PITRM1-202ENST00000380989 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 RASSF7Q02833 373 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 CCDC93Q567U6 631 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
PITRM1-202ENST00000380989 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
PITRM1-202ENST00000380989 CCDC73Q6ZRK6 1079 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
PITRM1-202ENST00000380989 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
PITRM1-202ENST00000380989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.28□□□□□ -0.28
PITRM1-202ENST00000380989 PICALMQ13492 652 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 CTR9Q6PD62 1173 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 WDR24Q96S15 920 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.27□□□□□ -0.28
PITRM1-202ENST00000380989 KIAA1551Q9HCM1 1747 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 MROH7-TTC4A0A0A0MT08 1334 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 CCDC66A2RUB6 948 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 NSUN7Q8NE18 718 aaKnown RBP13.27□□□□□ -0.28
PITRM1-202ENST00000380989 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 FEZ2Q9UHY8 353 aaPredicted RBP13.27□□□□□ -0.28
PITRM1-202ENST00000380989 SCAF8Q9UPN6 1271 aaKnown RBP13.27□□□□□ -0.28
PITRM1-202ENST00000380989 DAGLAQ9Y4D2 1042 aa13.27□□□□□ -0.28
PITRM1-202ENST00000380989 DHX32Q7L7V1 743 aaKnown RBP13.27□□□□□ -0.29
PITRM1-202ENST00000380989 ENGASEQ8NFI3 743 aa13.27□□□□□ -0.29
PITRM1-202ENST00000380989 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
PITRM1-202ENST00000380989 DLEC1Q9Y238 1755 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 FAM205AQ6ZU69 1335 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 PRC1O43663 620 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 SFPQP23246 707 aaKnown RBP eCLIP13.26□□□□□ -0.29
PITRM1-202ENST00000380989 OAS2P29728 719 aaKnown RBP13.26□□□□□ -0.29
PITRM1-202ENST00000380989 USP5P45974 858 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 PRELPP51888 382 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 TGFB2P61812 414 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 PPARAQ07869 468 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 KRT32Q14532 448 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 SYCP1Q15431 976 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 PHACTR2O75167 634 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 RBM5P52756 815 aaKnown RBP eCLIP13.26□□□□□ -0.29
PITRM1-202ENST00000380989 EXOSC10Q01780 885 aaKnown RBP13.26□□□□□ -0.29
PITRM1-202ENST00000380989 KARSQ15046 597 aaKnown RBP13.26□□□□□ -0.29
PITRM1-202ENST00000380989 TICAM2Q86XR7 235 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
PITRM1-202ENST00000380989 SLC44A5Q8NCS7 719 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 UBXN4Q92575 508 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 SHTN1A0MZ66 631 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 PLCD1P51178 756 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 DACT2Q5SW24 774 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 PODNQ7Z5L7 613 aa13.26□□□□□ -0.29
PITRM1-202ENST00000380989 RALYLQ86SE5 291 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms