RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 CALCRLQ16602 461 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 ARHGEF16Q5VV41 709 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 MTMR3Q13615 1198 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 H7C1D1 291 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 IRS4O14654 1257 aaPredicted RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 KRT33BQ14525 404 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 BANK1Q8NDB2 785 aa12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
PTCHD1-201ENST00000379361 VWA3AA6NCI4 1184 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 C11orf95C9JLR9 678 aaPredicted RBP12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 N4BP2L2Q92802 583 aaPredicted RBP12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 BRF1Q92994 677 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 SPDL1Q96EA4 605 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 GGA1Q9UJY5 639 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 GNA14O95837 355 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 TROVE2P10155 538 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 NLRX1Q86UT6 975 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 NME8Q8N427 588 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 LZICQ8WZA0 190 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 USTQ9Y2C2 406 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 FAM95CA0A1B0GW59 222 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ARHGEF37A1IGU5 675 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ALDH1L1O75891 902 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 OCM2P0CE71 109 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 OCMP0CE72 109 aaPredicted RBP12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 CD19P15391 556 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 TNNI1P19237 187 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 GNPATO15228 680 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 PLEKHG3A1L390 1219 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 IGSF22Q8N9C0 903 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 TBCCQ15814 346 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 GNPTABQ3T906 1256 aa12.36□□□□□ -0.43
PTCHD1-201ENST00000379361 RAP1GDS1P52306 607 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 DCPSQ96C86 337 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 ASCC3Q8N3C0 2202 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 AOPEPQ8N6M6 819 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 ANGPTL3Q9Y5C1 460 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 ARHGAP42A6NI28 874 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 STK25O00506 426 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 LETM2Q2VYF4 491 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 FAM47CQ5HY64 1035 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 NME9Q86XW9 330 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 EIF3CLB5ME19 914 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 EVI5O60447 810 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 RHOXF2BP0C7M4 288 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 RNF168Q8IYW5 571 aaPredicted RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 EIF3CQ99613 913 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 RHOXF2Q9BQY4 288 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 NOP14P78316 857 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 RABEP2Q9H5N1 569 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 VSIG1Q86XK7 387 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 GIMAP6Q6P9H5 292 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 CTTNBP2NLQ9P2B4 639 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 USH1GQ495M9 461 aa12.35□□□□□ -0.43
PTCHD1-201ENST00000379361 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 RNF217Q8TC41 542 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 KRT15P19012 456 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 TTLL7Q6ZT98 887 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 UBN1Q9NPG3 1134 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 F6X3S4 739 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 MUM1Q2TAK8 710 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 CTAGE3PQ8IX95 158 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 IFNA8P32881 189 aa12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
PTCHD1-201ENST00000379361 MYCT1Q8N699 235 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms