RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 CRACR2BQ8N4Y2 399 aaPredicted RBP20.39■□□□□ 0.86
LYSMD4-203ENST00000378904 AIFM3Q96NN9 605 aa20.39■□□□□ 0.86
LYSMD4-203ENST00000378904 EHD4Q9H223 541 aa20.39■□□□□ 0.86
LYSMD4-203ENST00000378904 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.86
LYSMD4-203ENST00000378904 DDTLA6NHG4 134 aaPredicted RBP20.39■□□□□ 0.85
LYSMD4-203ENST00000378904 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.85
LYSMD4-203ENST00000378904 TMEM87AQ8NBN3 555 aa20.39■□□□□ 0.85
LYSMD4-203ENST00000378904 GJB4Q9NTQ9 266 aa20.39■□□□□ 0.85
LYSMD4-203ENST00000378904 STX8Q9UNK0 236 aa20.39■□□□□ 0.85
LYSMD4-203ENST00000378904 UBE2Q2LH0YL09 131 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 FIBPO43427 364 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 PNMA1Q8ND90 353 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 RGS22Q8NE09 1264 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 CTCFLQ8NI51 663 aaPredicted RBP20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 PLIN4Q96Q06 1357 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 GOLGA6L3A6NEY3 463 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 ENTPD3O75355 529 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 SHMT1P34896 483 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 PRELPP51888 382 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 KRT85P78386 507 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 TNIP1Q15025 636 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 KLHL40Q2TBA0 621 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 SH3BP5LQ7L8J4 393 aa20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 ZSCAN29Q8IWY8 852 aaPredicted RBP20.38■□□□□ 0.85
LYSMD4-203ENST00000378904 PLEKHA8P1O95397 391 aa20.37■□□□□ 0.85
LYSMD4-203ENST00000378904 WASF1Q92558 559 aa20.37■□□□□ 0.85
LYSMD4-203ENST00000378904 TMEM47Q9BQJ4 181 aa20.37■□□□□ 0.85
LYSMD4-203ENST00000378904 TMOD2Q9NZR1 351 aa20.37■□□□□ 0.85
LYSMD4-203ENST00000378904 PI4KBQ9UBF8 816 aa20.37■□□□□ 0.85
LYSMD4-203ENST00000378904 AKR1B1P15121 316 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 GUCY1A2P33402 732 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 TMTC3Q6ZXV5 915 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 CEP95Q96GE4 821 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 RNF26Q9BY78 433 aaPredicted RBP20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 GREB1LQ9C091 1923 aaPredicted RBP20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 DEXIO95424 95 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 SLURP2P0DP57 97 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 FUT2Q10981 343 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 MTMR14Q8NCE2 650 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 FHDC1Q9C0D6 1143 aaPredicted RBP20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 DNAJC18Q9H819 358 aa20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 ZNF70Q9UC06 446 aaPredicted RBP20.36■□□□□ 0.85
LYSMD4-203ENST00000378904 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 CSPP1Q1MSJ5 1256 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 KRT40Q6A162 431 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 MAP3K14Q99558 947 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 TAOK2Q9UL54 1235 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 ATRNL1Q5VV63 1379 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 COL2A1P02458 1487 aaPredicted RBP20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 NOVP48745 357 aa20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 GZF1Q9H116 711 aaPredicted RBP20.35■□□□□ 0.85
LYSMD4-203ENST00000378904 TCP10L2B9ZVM9 353 aa20.34■□□□□ 0.85
LYSMD4-203ENST00000378904 GADD45BO75293 160 aaPredicted RBP20.34■□□□□ 0.85
LYSMD4-203ENST00000378904 KIF5BP33176 963 aa20.34■□□□□ 0.85
LYSMD4-203ENST00000378904 TRIM29Q14134 588 aa20.34■□□□□ 0.85
LYSMD4-203ENST00000378904 SPDYE2Q495Y8 402 aa20.34■□□□□ 0.85
LYSMD4-203ENST00000378904 TFIP11Q9UBB9 837 aaKnown RBP20.34■□□□□ 0.85
LYSMD4-203ENST00000378904 FZD9O00144 591 aa20.33■□□□□ 0.85
LYSMD4-203ENST00000378904 PRPF3O43395 683 aaKnown RBP20.33■□□□□ 0.85
LYSMD4-203ENST00000378904 AKAP17AQ02040 695 aaKnown RBP20.33■□□□□ 0.85
LYSMD4-203ENST00000378904 GRM4Q14833 912 aa20.33■□□□□ 0.85
LYSMD4-203ENST00000378904 FOXP4Q8IVH2 680 aaPredicted RBP20.33■□□□□ 0.85
LYSMD4-203ENST00000378904 SRBD1Q8N5C6 995 aaKnown RBP20.33■□□□□ 0.85
LYSMD4-203ENST00000378904 CNTNAP5Q8WYK1 1306 aa20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 IGKV6D-41A0A0C4DH26 115 aa20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 FAM196BA6NMK8 535 aa20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 TOP1P11387 765 aaKnown RBP20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 EIF6P56537 245 aaKnown RBP20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 ZBED3Q96IU2 234 aaPredicted RBP20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 TRIM34Q9BYJ4 488 aa20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 MTMR4Q9NYA4 1195 aa20.33■□□□□ 0.84
LYSMD4-203ENST00000378904 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 MYH4Q9Y623 1939 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 SHTN1A0MZ66 631 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 RPS12P25398 132 aaKnown RBP20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 SCAND2PQ9GZW5 306 aaPredicted RBP20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 BAZ2BQ9UIF8 2168 aaKnown RBP20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 KIF28PB7ZC32 967 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 MBD3O95983 291 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 CCDC17Q96LX7 622 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 MTMR7Q9Y216 660 aa20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
LYSMD4-203ENST00000378904 PKN1Q16512 942 aa20.31■□□□□ 0.84
LYSMD4-203ENST00000378904 METTL16Q86W50 562 aaKnown RBP20.31■□□□□ 0.84
LYSMD4-203ENST00000378904 STAG2Q8N3U4 1231 aa20.31■□□□□ 0.84
LYSMD4-203ENST00000378904 VEZTQ9HBM0 779 aa20.31■□□□□ 0.84
LYSMD4-203ENST00000378904 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
LYSMD4-203ENST00000378904 MPHOSPH10O00566 681 aaKnown RBP20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 WNT10BO00744 389 aa20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 MYO1BO43795 1136 aa20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 CLCN1P35523 988 aa20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 MMP14P50281 582 aa20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 TATDN1Q6P1N9 297 aa20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 ARHGAP27Q6ZUM4 889 aa20.3■□□□□ 0.84
LYSMD4-203ENST00000378904 BRAPQ7Z569 592 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms