RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ICA1Q05084 483 aa23.74■■□□□ 1.39
RER1-204ENST00000378518 MTMR2Q13614 643 aa23.74■■□□□ 1.39
RER1-204ENST00000378518 PTPN18Q99952 460 aa23.74■■□□□ 1.39
RER1-204ENST00000378518 ARHGEF10LQ9HCE6 1279 aa23.74■■□□□ 1.39
RER1-204ENST00000378518 TMOD4Q9NZQ9 345 aa23.74■■□□□ 1.39
RER1-204ENST00000378518 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.74■■□□□ 1.395e-6■■■□□ 15.8
RER1-204ENST00000378518 U3KPZ7 1027 aaPredicted RBP23.74■■□□□ 1.39
RER1-204ENST00000378518 USP14P54578 494 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 HMGCS2P54868 508 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 SH3D19Q5HYK7 790 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 AKNAD1Q5T1N1 836 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 MFSD6Q6ZSS7 791 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 ANKRD23Q86SG2 305 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 PROCA1Q8NCQ7 364 aaPredicted RBP23.73■■□□□ 1.39
RER1-204ENST00000378518 SH2D4AQ9H788 454 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 KANSL2Q9H9L4 492 aa23.73■■□□□ 1.39
RER1-204ENST00000378518 TSPY2A6NKD2 308 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 BTBD19C9JJ37 291 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 ORC4O43929 436 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 PTH1RQ03431 593 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 USP17L2Q6R6M4 530 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 FAM43AQ8N2R8 423 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 STAG1Q8WVM7 1258 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 ANO2Q9NQ90 1003 aa23.72■■□□□ 1.39
RER1-204ENST00000378518 PLIN4Q96Q06 1357 aa23.71■■□□□ 1.39
RER1-204ENST00000378518 FOXN1O15353 648 aa23.71■■□□□ 1.39
RER1-204ENST00000378518 RANBP6O60518 1105 aaKnown RBP23.71■■□□□ 1.39
RER1-204ENST00000378518 FGRP09769 529 aa23.71■■□□□ 1.39
RER1-204ENST00000378518 CTCFP49711 727 aaPredicted RBP23.71■■□□□ 1.39
RER1-204ENST00000378518 TAF1CQ15572 869 aaPredicted RBP23.71■■□□□ 1.39
RER1-204ENST00000378518 RRP12Q5JTH9 1297 aaKnown RBP23.71■■□□□ 1.39
RER1-204ENST00000378518 NT5C2P49902 561 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 TFAP4Q01664 338 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 PABPC4Q13310 644 aaKnown RBP eCLIP23.7■■□□□ 1.383e-6■□□□□ 8
RER1-204ENST00000378518 MOGSQ13724 837 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 PPP4R3BQ5MIZ7 849 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 TBC1D10CQ8IV04 446 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 NEDD1Q8NHV4 660 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 KIAA1683Q9H0B3 1180 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 AGTPBP1Q9UPW5 1226 aa23.7■■□□□ 1.38
RER1-204ENST00000378518 PDHXO00330 501 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 ATP2B2Q01814 1243 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 ZYXQ15942 572 aaKnown RBP23.69■■□□□ 1.38
RER1-204ENST00000378518 FAM47AQ5JRC9 791 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 ACER1Q8TDN7 264 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 CFHR5Q9BXR6 569 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 LSG1Q9H089 658 aaKnown RBP23.69■■□□□ 1.38
RER1-204ENST00000378518 NBPF3Q9H094 633 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 ZFYVE28Q9HCC9 887 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 INCENPQ9NQS7 918 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 PNMA3Q9UL41 463 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 SLC45A1Q9Y2W3 748 aa23.69■■□□□ 1.38
RER1-204ENST00000378518 EEF2P13639 858 aaKnown RBP23.68■■□□□ 1.38
RER1-204ENST00000378518 GPAT2Q6NUI2 795 aa23.68■■□□□ 1.38
RER1-204ENST00000378518 CLEC10AQ8IUN9 316 aa23.68■■□□□ 1.38
RER1-204ENST00000378518 ESR2Q92731 530 aa23.68■■□□□ 1.38
RER1-204ENST00000378518 PARK7Q99497 189 aaKnown RBP23.68■■□□□ 1.38
RER1-204ENST00000378518 TSKSQ9UJT2 592 aa23.68■■□□□ 1.38
RER1-204ENST00000378518 RBM8AQ9Y5S9 174 aaKnown RBP23.68■■□□□ 1.38
RER1-204ENST00000378518 PCNTO95613 3336 aa23.67■■□□□ 1.38
RER1-204ENST00000378518 TBC1D8O95759 1140 aa23.67■■□□□ 1.38
RER1-204ENST00000378518 C12orf42Q96LP6 360 aa23.67■■□□□ 1.38
RER1-204ENST00000378518 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.67■■□□□ 1.38
RER1-204ENST00000378518 CNNM2Q9H8M5 875 aa23.67■■□□□ 1.38
RER1-204ENST00000378518 NYAP2Q9P242 653 aa23.67■■□□□ 1.38
RER1-204ENST00000378518 TACC3Q9Y6A5 838 aa23.67■■□□□ 1.38
RER1-204ENST00000378518 NEDD4P46934 1319 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 IGKV6D-41A0A0C4DH26 115 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 A0A1W2PRG0 241 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 HSPA8P11142 646 aaKnown RBP23.66■■□□□ 1.38
RER1-204ENST00000378518 CRHR2Q13324 411 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 DGKZQ13574 1117 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 TREML2Q5T2D2 321 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 CEP95Q96GE4 821 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 KRT23Q9C075 422 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 EMILIN3Q9NT22 766 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 TMX2Q9Y320 296 aa23.66■■□□□ 1.38
RER1-204ENST00000378518 TTLL1O95922 423 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 CYP21A2P08686 494 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 OSBPP22059 807 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 TRDNQ13061 729 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 GOPCQ9HD26 462 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 MTMR4Q9NYA4 1195 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
RER1-204ENST00000378518 REC8O95072 547 aa23.64■■□□□ 1.37
RER1-204ENST00000378518 LPAR1Q92633 364 aa23.64■■□□□ 1.37
RER1-204ENST00000378518 VCPKMTQ9H867 229 aa23.64■■□□□ 1.37
RER1-204ENST00000378518 CLIP2Q9UDT6 1046 aa23.64■■□□□ 1.37
RER1-204ENST00000378518 LBX1P52954 281 aa23.63■■□□□ 1.37
RER1-204ENST00000378518 IRX3P78415 501 aaPredicted RBP23.63■■□□□ 1.37
RER1-204ENST00000378518 RNF20Q5VTR2 975 aa23.63■■□□□ 1.37
RER1-204ENST00000378518 SIAH1Q8IUQ4 282 aa23.63■■□□□ 1.37
RER1-204ENST00000378518 SYNPO2Q9UMS6 1093 aa23.63■■□□□ 1.37
RER1-204ENST00000378518 STX8Q9UNK0 236 aa23.63■■□□□ 1.37
RER1-204ENST00000378518 RAD21O60216 631 aa23.62■■□□□ 1.37
RER1-204ENST00000378518 TLR2O60603 784 aa23.62■■□□□ 1.37
RER1-204ENST00000378518 VCAM1P19320 739 aa23.62■■□□□ 1.37
RER1-204ENST00000378518 HOXA7P31268 230 aaPredicted RBP23.62■■□□□ 1.37
RER1-204ENST00000378518 NOM1Q5C9Z4 860 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms