RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 GCP02774 474 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 PPFIA1Q13136 1202 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
PRDM16-203ENST00000378391 SATB2Q9UPW6 733 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 A0A087WWV3 80 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
PRDM16-203ENST00000378391 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
PRDM16-203ENST00000378391 RNF8O76064 485 aa16.13■□□□□ 0.17
PRDM16-203ENST00000378391 MPHOSPH6Q99547 160 aaKnown RBP16.13■□□□□ 0.17
PRDM16-203ENST00000378391 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 NECTIN1Q15223 517 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 PLEKHG3A1L390 1219 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 PARP1P09874 1014 aaKnown RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 MAP3K7CLP57077 242 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 CCDC51Q96ER9 411 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 KIAA1468Q9P260 1216 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 V9GY48 417 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 IL2RBP14784 551 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 OAS2P29728 719 aaKnown RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 HPDP32754 393 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 GJC1P36383 396 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 BRD3Q15059 726 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 VIMP08670 466 aaKnown RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 ARHGAP25P42331 645 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 MTX1Q13505 466 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 DCAF17Q5H9S7 520 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 SERPINA10Q9UK55 444 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 METP08581 1390 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 KCNQ3O43525 872 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 EPB41P11171 864 aaKnown RBP16.12■□□□□ 0.17
PRDM16-203ENST00000378391 MAGEA1P43355 309 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 PICALMQ13492 652 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 DSCC1Q9BVC3 393 aa16.12■□□□□ 0.17
PRDM16-203ENST00000378391 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
PRDM16-203ENST00000378391 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 CCDC84Q86UT8 332 aaPredicted RBP16.11■□□□□ 0.17
PRDM16-203ENST00000378391 PPP1R13BQ96KQ4 1090 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 TRIM7Q9C029 511 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 TSKSQ9UJT2 592 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 INTS8Q75QN2 995 aaKnown RBP16.11■□□□□ 0.17
PRDM16-203ENST00000378391 UIMC1Q96RL1 719 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRDM16-203ENST00000378391 CETN3O15182 167 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 ANKRD7Q92527 254 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 XAGE2Q96GT9 111 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 CSRNP2Q9H175 543 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 HDAC9Q9UKV0 1011 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 FRMD4BQ9Y2L6 1034 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 MYO3AQ8NEV4 1616 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 PEX19P40855 299 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 PAK2Q13177 524 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 USP6NLQ92738 828 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 IQCDQ96DY2 449 aa16.11■□□□□ 0.17
PRDM16-203ENST00000378391 SCRN1Q12765 414 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 MYSM1Q5VVJ2 828 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 FBXO38Q6PIJ6 1188 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 CCDC63Q8NA47 563 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 MSANTD4Q8NCY6 345 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 ATP5JP18859 108 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 TLR7Q9NYK1 1049 aaKnown RBP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 MAPK8IP1Q9UQF2 711 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 PFKFB2O60825 505 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 PCK1P35558 622 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 CCDC144BQ3MJ40 725 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 MIER3Q7Z3K6 550 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 UTP11Q9Y3A2 253 aaKnown RBP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 CCDC92Q53HC0 331 aaPredicted RBP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 ZNF589Q86UQ0 364 aaPredicted RBP16.1■□□□□ 0.17
PRDM16-203ENST00000378391 IL25Q9H293 177 aa16.1■□□□□ 0.17
PRDM16-203ENST00000378391 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
PRDM16-203ENST00000378391 ZNF274Q96GC6 653 aaPredicted RBP16.09■□□□□ 0.17
PRDM16-203ENST00000378391 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
PRDM16-203ENST00000378391 TNFAIP3P21580 790 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 PRDM4Q9UKN5 801 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 KDRP35968 1356 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 MAP7D1Q3KQU3 841 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 TAB2Q9NYJ8 693 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 YEATS2Q9ULM3 1422 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 PTPRMP28827 1452 aa16.09■□□□□ 0.17
PRDM16-203ENST00000378391 TAF5LO75529 589 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 237.3 ms