RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZNF202O95125 648 aa9.27□□□□□ -0.92
CKAP2-203ENST00000378037 C11orf57Q6ZUT1 292 aaPredicted RBP9.27□□□□□ -0.92
CKAP2-203ENST00000378037 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.92
CKAP2-203ENST00000378037 EPSTI1Q96J88 318 aa9.27□□□□□ -0.92
CKAP2-203ENST00000378037 SH2D3AQ9BRG2 576 aa9.27□□□□□ -0.92
CKAP2-203ENST00000378037 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.92
CKAP2-203ENST00000378037 BSDC1Q9NW68 430 aaPredicted RBP9.27□□□□□ -0.92
CKAP2-203ENST00000378037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.27□□□□□ -0.92
CKAP2-203ENST00000378037 PP2D1A8MPX8 630 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 CTDNEP1O95476 244 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 ARID5AQ03989 594 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 UBE4AQ14139 1066 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 UBE3CQ15386 1083 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 TM6SF1Q9BZW5 370 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 CD209Q9NNX6 404 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 CCNT1O60563 726 aaKnown RBP9.27□□□□□ -0.93
CKAP2-203ENST00000378037 HLA-DOAP06340 250 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 TXLNAP40222 546 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 R3HDM1Q15032 1099 aaKnown RBP9.27□□□□□ -0.93
CKAP2-203ENST00000378037 VPS72Q15906 364 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
CKAP2-203ENST00000378037 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
CKAP2-203ENST00000378037 ILDR1Q86SU0 546 aaPredicted RBP9.27□□□□□ -0.93
CKAP2-203ENST00000378037 COL23A1Q86Y22 540 aaPredicted RBP9.27□□□□□ -0.93
CKAP2-203ENST00000378037 NAT10Q9H0A0 1025 aaKnown RBP9.27□□□□□ -0.93
CKAP2-203ENST00000378037 PFKFB1P16118 471 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 PTPROQ16827 1216 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 ENAHQ8N8S7 591 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-203ENST00000378037 ZSCAN16Q9H4T2 348 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-203ENST00000378037 DCP1AQ9NPI6 582 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-203ENST00000378037 SERTAD1Q9UHV2 236 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 COL5A3P25940 1745 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-203ENST00000378037 KLRF2D3W0D1 207 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 CFBP00751 764 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 GRAPQ13588 217 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 UBE2SQ16763 222 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 GRAPLQ8TC17 118 aaPredicted RBP9.26□□□□□ -0.93
CKAP2-203ENST00000378037 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 BCL9LQ86UU0 1499 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 C5P01031 1676 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 GYS1P13807 737 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 SLC1A4P43007 532 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 NFIAQ12857 509 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 DDX19AQ9NUU7 478 aaKnown RBP9.26□□□□□ -0.93
CKAP2-203ENST00000378037 KCNH3Q9ULD8 1083 aa9.26□□□□□ -0.93
CKAP2-203ENST00000378037 UQCRHLA0A096LP55 91 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 UQCRHP07919 91 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 CYP4A11Q02928 519 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 JDP2Q8WYK2 163 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 ZMYND15Q9H091 742 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 POLLQ9UGP5 575 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 XDHP47989 1333 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 SH2B2O14492 632 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 ONECUT3O60422 494 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 IGSF3O75054 1194 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 FDPSP14324 419 aaKnown RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 ARID4AP29374 1257 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 KIF5BP33176 963 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 CTR9Q6PD62 1173 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 DRC1Q96MC2 740 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 ANO10Q9NW15 660 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 RPAP1Q9BWH6 1393 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 PARP1P09874 1014 aaKnown RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 HOXA13P31271 388 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 KARSQ15046 597 aaKnown RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 PAXIP1Q6ZW49 1069 aaPredicted RBP9.25□□□□□ -0.93
CKAP2-203ENST00000378037 WASF1Q92558 559 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 SMARCE1Q969G3 411 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 VPS16Q9H269 839 aa9.25□□□□□ -0.93
CKAP2-203ENST00000378037 TNNT1P13805 278 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 GNAT2P19087 354 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 KRT2P35908 639 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 TECP42680 631 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 CDR1P51861 262 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 TRIM28Q13263 835 aaKnown RBP9.24□□□□□ -0.93
CKAP2-203ENST00000378037 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 TTBK2Q6IQ55 1244 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 MB21D2Q8IYB1 491 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-203ENST00000378037 PIGSQ96S52 555 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 HOOK1Q9UJC3 728 aaKnown RBP9.24□□□□□ -0.93
CKAP2-203ENST00000378037 STAT6P42226 847 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 DDR1Q08345 913 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 PTGDRQ13258 359 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 NBPF11Q86T75 865 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 NSUN4Q96CB9 384 aaKnown RBP9.24□□□□□ -0.93
CKAP2-203ENST00000378037 TMEM87BQ96K49 555 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 PLEKHA4Q9H4M7 779 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 THRAP3Q9Y2W1 955 aaKnown RBP9.24□□□□□ -0.93
CKAP2-203ENST00000378037 TAF1LQ8IZX4 1826 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 UBASH3AP57075 661 aa9.24□□□□□ -0.93
CKAP2-203ENST00000378037 ASIC1P78348 528 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms